PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG055620.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 196aa    MW: 21268.1 Da    PI: 7.7992
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG055620.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383.1e-1253100254
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       r ++ ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+++L
  TRIDC4BG055620.2  53 RSKNLMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYVNEL 100
                       677889**********************66......***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
DHPSCGNLDH GGGSSSSPVP FVFGAGGAGE TSEMTRGVFS GGHPRSKLNR GTRSKNLMAE  60
RRRRKRLNDR LSMLRSIVPK ISKMDRTSIL GDTIDYVNEL TERIKEIGAT PEELNLLNTR  120
KNFSSGSSEE MAMRNSTKFV IEKQGDGEMR IDMCCATSPG VLISTVSALE VLGLEIEQCV  180
VSCFGDFAMQ ASCSQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16067ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-49bHLH family protein