PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG055600.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 343aa MW: 37221.7 Da PI: 4.7195

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG055600.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	174	216	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+++L TRIDC4BG055600.2 174 MAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYVNEL 216 89*******************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MDQLDEQSFL DELMSLRREE APWLAYTGSG MMTTSDLLFY GGEGAGEASS GTDLAGPFLQ 60 QPMAPPHRSH EEFNFDYLSE VCNPYRSCVG VVPRHGVAHG AGQALVQYPL HDAMAEDDPS 120 GSNLHRGGGS SSSPVPFVFG AGGAGESPEM IRGVFTGAHA RSKLNGGTTS KNLMAERRRR 180 KRLNDRLSML RSIVPKISKM DRTSILGDTI DYVNELTERI KTLEEEIGAT PEELNLLNTT 240 KNFFSGSSEE MPMRNSTKFV IEKQGDGETR IDICCATSPG VLISTVSALE VLGLEIEQCV 300 FSCFGDFAMQ ASCSQEEGRS RVTSTDEIKQ ALFTSAGYGG RCL

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MDQLDEQSFL DELMSLRREE APWLAYTGSG MMTTSDLLFY GGEGAGEASS GTDLAGPFLQ  60
QPMAPPHRSH EEFNFDYLSE VCNPYRSCVG VVPRHGVAHG AGQALVQYPL HDAMAEDDPS  120
GSNLHRGGGS SSSPVPFVFG AGGAGESPEM IRGVFTGAHA RSKLNGGTTS KNLMAERRRR  180
KRLNDRLSML RSIVPKISKM DRTSILGDTI DYVNELTERI KTLEEEIGAT PEELNLLNTT  240
KNFFSGSSEE MPMRNSTKFV IEKQGDGETR IDICCATSPG VLISTVSALE VLGLEIEQCV  300
FSCFGDFAMQ ASCSQEEGRS RVTSTDEIKQ ALFTSAGYGG RCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	183	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	3e-58	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG055600.2