PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG054710.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 679aa MW: 75249.2 Da PI: 6.6309

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG054710.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	87.2	1.4e-27	365	415	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l+k+F++++k+AAk+Lgvc+T+LKriCR++GI+RWP+Rkik++ TRIDC4BG054710.6 365 EKTVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV 415 689**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
PIPEVISLFA PPSLMIPLCS KTTSVKILQE VDLRGSDVSS DPRAQVIDAS HRAIVPELVH 60 VLRAVCETHK LPLAQTWIPC VCQAKRASRH SDEKYKYCVS TVDEACYVRD AAMTGFHQAC 120 SEHHLFRGEG VVGTALGTNE PCFCPDITAY SKVQYPLSHY AKLFGLRAAV AIRLRSVKTG 180 SMDLILEFFL PSNCINSEEQ GSMLNSLSNT IQQASCTLRV VGVKELANDG SPESSSPTPP 240 EVCDKPAEIL DELHTSGINI PARTRSVDAS EEVSSWIASL VDVQNSGAQG ETDCGLPFGL 300 RKQEDEGFSV TAGWPTSPVL VPEDKSFFPG FTKHEEYEVK GSPFSSDRSL SNSDKVIEKR 360 RTKIEKTVSL QELRKHFAGS LKEAAKNLGV CPTTLKRICR HHGIDRWPSR KIKKVGHSLK 420 KLQMVIDSVH GAEGTVRLSS LYENFTKTTW SERELQGDLS YPASEQKVQL EPSVPDRQCE 480 SRFSPHTSGS NSLSPTYSQS SNSSLGCSSE PKPQQQQSSA PQLAVKQEFF MEENQSSTQM 540 KAASHDELRL FTEEKPVTLC RSQSHMLFSE HKPMANMSGM QEAKPDSLKI KAMYGEERCI 600 FRLQPSWGFE KLKEEIAKRF GISQEVYDLK YLDDESEWVL LTCDADLLEC IDVYKSSSAK 660 TVRISVNPAV QPILRGSFG

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

PIPEVISLFA PPSLMIPLCS KTTSVKILQE VDLRGSDVSS DPRAQVIDAS HRAIVPELVH  60
VLRAVCETHK LPLAQTWIPC VCQAKRASRH SDEKYKYCVS TVDEACYVRD AAMTGFHQAC  120
SEHHLFRGEG VVGTALGTNE PCFCPDITAY SKVQYPLSHY AKLFGLRAAV AIRLRSVKTG  180
SMDLILEFFL PSNCINSEEQ GSMLNSLSNT IQQASCTLRV VGVKELANDG SPESSSPTPP  240
EVCDKPAEIL DELHTSGINI PARTRSVDAS EEVSSWIASL VDVQNSGAQG ETDCGLPFGL  300
RKQEDEGFSV TAGWPTSPVL VPEDKSFFPG FTKHEEYEVK GSPFSSDRSL SNSDKVIEKR  360
RTKIEKTVSL QELRKHFAGS LKEAAKNLGV CPTTLKRICR HHGIDRWPSR KIKKVGHSLK  420
KLQMVIDSVH GAEGTVRLSS LYENFTKTTW SERELQGDLS YPASEQKVQL EPSVPDRQCE  480
SRFSPHTSGS NSLSPTYSQS SNSSLGCSSE PKPQQQQSSA PQLAVKQEFF MEENQSSTQM  540
KAASHDELRL FTEEKPVTLC RSQSHMLFSE HKPMANMSGM QEAKPDSLKI KAMYGEERCI  600
FRLQPSWGFE KLKEEIAKRF GISQEVYDLK YLDDESEWVL LTCDADLLEC IDVYKSSSAK  660
TVRISVNPAV QPILRGSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	1e-138	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG054710.6