PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG054710.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 567aa MW: 62896.9 Da PI: 6.4577

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG054710.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	87.5	1.1e-27	253	303	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l+k+F++++k+AAk+Lgvc+T+LKriCR++GI+RWP+Rkik++ TRIDC4BG054710.4 253 EKTVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV 303 689**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MTGFHQACSE HHLFRGEGVV GTALGTNEPC FCPDITAYSK VQYPLSHYAK LFGLRAAVAI 60 RLRSVKTGSM DLILEFFLPS NCINSEEQGS MLNSLSNTIQ QASCTLRVVG VKELANDGSP 120 ESSSPTPPEV CDKPAEILDE LHTSGINIPA RTRSVDASEE VSSWIASLVD VQNSGAQGET 180 DCGLPFGLRK QEDEGFSVTA GWPTSPVLVP EDKSFFPGFT KHEEYEVKGS PFSSDRSLSN 240 SDKVIEKRRT KIEKTVSLQE LRKHFAGSLK EAAKNLGVCP TTLKRICRHH GIDRWPSRKI 300 KKVGHSLKKL QMVIDSVHGA EGTVRLSSLY ENFTKTTWSE RELQGDLSYP ASEQKVQLEP 360 SVPDRQCESR FSPHTSGSNS LSPTYSQSSN SSLGCSSEPK PQQQQSSAPQ LAVKQEFFME 420 ENQSSTQMKA ASHDELRLFT EEKPVTLCRS QSHMLFSEHK PMANMSGMQE AKPDSLKIKA 480 MYGEERCIFR LQPSWGFEKL KEEIAKRFGI SQEVYDLKYL DDESEWVLLT CDADLLECID 540 VYKSSSAKTV RISVNPAVQP ILRGSFG

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MTGFHQACSE HHLFRGEGVV GTALGTNEPC FCPDITAYSK VQYPLSHYAK LFGLRAAVAI  60
RLRSVKTGSM DLILEFFLPS NCINSEEQGS MLNSLSNTIQ QASCTLRVVG VKELANDGSP  120
ESSSPTPPEV CDKPAEILDE LHTSGINIPA RTRSVDASEE VSSWIASLVD VQNSGAQGET  180
DCGLPFGLRK QEDEGFSVTA GWPTSPVLVP EDKSFFPGFT KHEEYEVKGS PFSSDRSLSN  240
SDKVIEKRRT KIEKTVSLQE LRKHFAGSLK EAAKNLGVCP TTLKRICRHH GIDRWPSRKI  300
KKVGHSLKKL QMVIDSVHGA EGTVRLSSLY ENFTKTTWSE RELQGDLSYP ASEQKVQLEP  360
SVPDRQCESR FSPHTSGSNS LSPTYSQSSN SSLGCSSEPK PQQQQSSAPQ LAVKQEFFME  420
ENQSSTQMKA ASHDELRLFT EEKPVTLCRS QSHMLFSEHK PMANMSGMQE AKPDSLKIKA  480
MYGEERCIFR LQPSWGFEKL KEEIAKRFGI SQEVYDLKYL DDESEWVLLT CDADLLECID  540
VYKSSSAKTV RISVNPAVQP ILRGSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	1e-112	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG054710.4