PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG054710.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 477aa MW: 53048.7 Da PI: 6.3038

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG054710.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	87.8	9.1e-28	163	213	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l+k+F++++k+AAk+Lgvc+T+LKriCR++GI+RWP+Rkik++ TRIDC4BG054710.2 163 EKTVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV 213 689**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MLNSLSNTIQ QASCTLRVVG VKELANDGSP ESSSPTPPEV CDKPAEILDE LHTSGINIPA 60 RTRSVDASEE VSSWIASLVD VQNSGAQGET DCGLPFGLRK QEDEGFSVTA GWPTSPVLVP 120 EDKSFFPGFT KHEEYEVKGS PFSSDRSLSN SDKVIEKRRT KIEKTVSLQE LRKHFAGSLK 180 EAAKNLGVCP TTLKRICRHH GIDRWPSRKI KKVGHSLKKL QMVIDSVHGA EGTVRLSSLY 240 ENFTKTTWSE RELQGDLSYP ASEQKVQLEP SVPDRQCESR FSPHTSGSNS LSPTYSQSSN 300 SSLGCSSEPK PQQQQSSAPQ LAVKQEFFME ENQSSTQMKA ASHDELRLFT EEKPVTLCRS 360 QSHMLFSEHK PMANMSGMQE AKPDSLKIKA MYGEERCIFR LQPSWGFEKL KEEIAKRFGI 420 SQEVYDLKYL DDESEWVLLT CDADLLECID VYKSSSAKTV RISVNPAVQP ILRGSFG

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MLNSLSNTIQ QASCTLRVVG VKELANDGSP ESSSPTPPEV CDKPAEILDE LHTSGINIPA  60
RTRSVDASEE VSSWIASLVD VQNSGAQGET DCGLPFGLRK QEDEGFSVTA GWPTSPVLVP  120
EDKSFFPGFT KHEEYEVKGS PFSSDRSLSN SDKVIEKRRT KIEKTVSLQE LRKHFAGSLK  180
EAAKNLGVCP TTLKRICRHH GIDRWPSRKI KKVGHSLKKL QMVIDSVHGA EGTVRLSSLY  240
ENFTKTTWSE RELQGDLSYP ASEQKVQLEP SVPDRQCESR FSPHTSGSNS LSPTYSQSSN  300
SSLGCSSEPK PQQQQSSAPQ LAVKQEFFME ENQSSTQMKA ASHDELRLFT EEKPVTLCRS  360
QSHMLFSEHK PMANMSGMQE AKPDSLKIKA MYGEERCIFR LQPSWGFEKL KEEIAKRFGI  420
SQEVYDLKYL DDESEWVLLT CDADLLECID VYKSSSAKTV RISVNPAVQP ILRGSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	9e-79	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG054710.2