PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4BG053980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 231aa MW: 26900.4 Da PI: 9.0161 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 178.1 | 2.3e-55 | 5 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL + ++e++ewyfFs +d+ky+tg+r+nrat +g+Wkatg+dk TRIDC4BG053980.1 5 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLTEhcgIGYEEQNEWYFFSFKDRKYPTGTRTNRATMAGFWKATGRDK 96 69****************************.9***************853543334677********************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +v++ +++l+g++ktLvfykgrap+g+ktdW+mheyrle TRIDC4BG053980.1 97 AVHE-RSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 134 ***9.999*****************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence |
MESCVPPGFR FHPTDEELVG YYLRKKVASQ KIDLDVIRDI DLYRIEPWDL TEHCGIGYEE 60 QNEWYFFSFK DRKYPTGTRT NRATMAGFWK ATGRDKAVHE RSRLIGMRKT LVFYKGRAPN 120 GQKTDWIMHE YRLETDENAP PQEEGWVVCR AFKKRTAYPN RGMMERWGSN YSYNEVNAMS 180 GAPFPDPNMA STYAAAAQMG KGASFKEEAE QLDGAAALLR YTSRRCRLRW Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G18060.1 | 1e-112 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4BG053980.1 |