PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG052680.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 226aa    MW: 23671.7 Da    PI: 7.4581
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG052680.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.7e-17117151135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C +  Tp+WR+gp g++tLCnaCG++y+  +l
  TRIDC4BG052680.3 117 CTHCASEVTPQWRQGPLGPRTLCNACGVRYKTGRL 151
                       *******************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MVGGGDVDKH AAAALAQDLP GLEVAAAAGD GELAAGAAAG EEDLEELEWL SNKDAFPSVE  60
TMAVEAVEEV PEPAPAAPSG RPAVGPRTKG RRRRVTAPWN LAEPPTLPPP LPAARRCTHC  120
ASEVTPQWRQ GPLGPRTLCN ACGVRYKTGR LLPEYRPANS PTFSPLLHSN SHRRVMQIRL  180
RSESEGEGEG EGASPAVRAI AKARRAERAA ARLAAKKDDG APAPAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.18e-34GATA family protein