PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG052680.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 171aa    MW: 18218.8 Da    PI: 11.3043
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG052680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.41.8e-175690135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C++C +  Tp+WR+gp g++tLCnaCG++y+  +l
  TRIDC4BG052680.1 56 CTHCASEVTPQWRQGPLGPRTLCNACGVRYKTGRL 90
                      *******************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MAVEAVEEVP EPAPAAPSGR PAVGPRTKGR RRRVTAPWNL AEPPTLPPPL PAARRCTHCA  60
SEVTPQWRQG PLGPRTLCNA CGVRYKTGRL LPEYRPANSP TFSPLLHSNS HRRVMQIRLR  120
SESEGEGEGE GASPAVRAIA KARRAERAAA RLAAKKDDGA PAPAPAQAAL P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.14e-34GATA family protein