PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG052240.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1026aa MW: 114678 Da PI: 6.1678

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG052240.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.5	7.2e-55	6	122	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een +f TRIDC4BG052240.9 6 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENINF 98 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Lee++ +ivlvhylevk TRIDC4BG052240.9 99 QRRSYWMLEEDYMHIVLVHYLEVK 122 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1026 aa Download sequence
MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN 60 WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE 120 VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SADIYSGGAG 180 YHSISRMQQH ENGGGSIIDA SVVSSYSPAS SVGNHQGLRA TSPNTGFYSH YQDNSPVIHN 240 ESTLGITFNG PSTQFDLSSW NEMTKLNKGI HQLPPYQSHV PSEQPPFTEG PGIESFSFDE 300 VYSNGLDIKD GGHADTDREA LWQLPSATDS TFATVDSFEQ NNKLLEEAIN FPVLKTQSSN 360 LSDILKDSFK KSDSFTRWMS KELAEVDDSQ VKSSSGLYWN SEDADNIIGA SSRDQLDQFT 420 LDPMVAQDQL FSITEYFPSW TYAGSKTRVL VTGRFLTSDE VIKLKWSCMF GEVEVPADIL 480 ADGTLRCYSP SHKPGRVPFY VTCSNRLACS EVREFEYRPS DSQYMDAPSP HGATNKIYLQ 540 ARLDELLSLG QDEQDEFQAA LSNPTKELID LNKKITSLMT NNDQWSELLK FADDNQLAPD 600 DRQDQFVESG MKEKLHIWLL RKAGGGGKGP SVLDDEGQGV LHLAAALGYD WAIRPTITAG 660 VSINFRDVHG WTALHWAAFC GRERTVVALI ALGAAPGALT DPRPDFPSGR TPADLASFNG 720 HKGISGFLAE FSLTSHLQTL NLKEAMGSNA SEVSGLPGIG DVTGRIASPS AGQGLQAGSM 780 GDSLGAVRNA AQAAARIYQV FRVQSFQRKQ AVQYEDDNGV ISDERAMSLL SYKPSKPGQF 840 GPMHAAATRI QNKFRGWKGR KEFLLIRQRI VKIQAHVRGH QVRKHYRKII WSVGIVEKVI 900 LRWRRRGAGL RGFRSTEGAT DSSTRSSSVD VTPVKPAEDD YNFLQEGRKQ TEERLQRALA 960 RVKSMVQYPE ARDQYQRILT VVTKMQESQP VEESMLEEST EMDEGFLMSE FKELWDDDMP 1020 PLPGYF

Sequence ? help Back to Top

Protein Sequence Length: 1026 aa Download sequence

MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN  60
WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE  120
VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SADIYSGGAG  180
YHSISRMQQH ENGGGSIIDA SVVSSYSPAS SVGNHQGLRA TSPNTGFYSH YQDNSPVIHN  240
ESTLGITFNG PSTQFDLSSW NEMTKLNKGI HQLPPYQSHV PSEQPPFTEG PGIESFSFDE  300
VYSNGLDIKD GGHADTDREA LWQLPSATDS TFATVDSFEQ NNKLLEEAIN FPVLKTQSSN  360
LSDILKDSFK KSDSFTRWMS KELAEVDDSQ VKSSSGLYWN SEDADNIIGA SSRDQLDQFT  420
LDPMVAQDQL FSITEYFPSW TYAGSKTRVL VTGRFLTSDE VIKLKWSCMF GEVEVPADIL  480
ADGTLRCYSP SHKPGRVPFY VTCSNRLACS EVREFEYRPS DSQYMDAPSP HGATNKIYLQ  540
ARLDELLSLG QDEQDEFQAA LSNPTKELID LNKKITSLMT NNDQWSELLK FADDNQLAPD  600
DRQDQFVESG MKEKLHIWLL RKAGGGGKGP SVLDDEGQGV LHLAAALGYD WAIRPTITAG  660
VSINFRDVHG WTALHWAAFC GRERTVVALI ALGAAPGALT DPRPDFPSGR TPADLASFNG  720
HKGISGFLAE FSLTSHLQTL NLKEAMGSNA SEVSGLPGIG DVTGRIASPS AGQGLQAGSM  780
GDSLGAVRNA AQAAARIYQV FRVQSFQRKQ AVQYEDDNGV ISDERAMSLL SYKPSKPGQF  840
GPMHAAATRI QNKFRGWKGR KEFLLIRQRI VKIQAHVRGH QVRKHYRKII WSVGIVEKVI  900
LRWRRRGAGL RGFRSTEGAT DSSTRSSSVD VTPVKPAEDD YNFLQEGRKQ TEERLQRALA  960
RVKSMVQYPE ARDQYQRILT VVTKMQESQP VEESMLEEST EMDEGFLMSE FKELWDDDMP  1020
PLPGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG052240.9