PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG052240.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1016aa MW: 113219 Da PI: 6.8939

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG052240.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.5	7.1e-55	6	122	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een + TRIDC4BG052240.12 6 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENIN 97 5559************************************************************************************** PP CG-1 94 fqrrcywlLeeelekivlvhylevk 118 fqrr+yw+Lee++ +ivlvhylevk TRIDC4BG052240.12 98 FQRRSYWMLEEDYMHIVLVHYLEVK 122 ********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1016 aa Download sequence
MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN 60 WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE 120 VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SDIYSGGAGY 180 HSISRMQQHE NGGGSIIDAS VVSSYSPASS VGNHQGLRAT SPNTGFYSHY QDNSPVIHNE 240 STLGITFNGP STQFDLSSWN EMTKLNKGIH QLPPYQSHVP SEQPPFTEGP GIESFSFDEV 300 YSNGLDIKDG GHADTDREAL WQLPSATDST FATVDSFEQN NKLLEEAINF PVLKTQSSNL 360 SDILKDSFKK SDSFTRWMSK ELAEVDDSQV KSSSGLYWNS EDADNIIGAS SRDQLDQFTL 420 DPMVAQDQLF SITEYFPSWT YAGSKTRVLV TGRFLTSDEV IKLKWSCMFG EVEVPADILA 480 DGTLRCYSPS HKPGRVPFYV TCSNRLACSE VREFEYRPSD SQYMDAPSPH GATNKIYLQA 540 RLDELLSLGQ DEQDEFQAAL SNPTKELIDL NKKITSLMTN NDQWSELLKF ADDNQLAPDD 600 RQDQFVESGM KEKLHIWLLR KAGGGGKGPS VLDDEGQGVL HLAAALGYDW AIRPTITAGV 660 SINFRDVHGW TALHWAAFCG RERTVVALIA LGAAPGALTD PRPDFPSGRT PADLASFNGH 720 KGISGFLAEF SLTSHLQTLN LKEAMGSNAS EVSGLPGIGD VTGRIASPSA GQGLQAGSMG 780 DSLGAVRNAA QAAARIYQVF RVQSFQRKQA VQYEDDNGVI SDERAMSLLS YKPSKPGQFG 840 PMHAAATRIQ NKFRGWKGRK EFLLIRQRIV KIQAHVRGHQ VRKHYRKIIW SVGIVEKVIL 900 RWRRRGAGLR GFRSTEGATD SSTRSSSVDV TPVKPAEDDY NFLQEGRKQT EERLQRALAR 960 VKSMVQYPEA RDQYQRILTV VTKMQESQQT NWTTIKSGGY SKVVLDGVEL ISKATS

Sequence ? help Back to Top

Protein Sequence Length: 1016 aa Download sequence

MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN  60
WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE  120
VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SDIYSGGAGY  180
HSISRMQQHE NGGGSIIDAS VVSSYSPASS VGNHQGLRAT SPNTGFYSHY QDNSPVIHNE  240
STLGITFNGP STQFDLSSWN EMTKLNKGIH QLPPYQSHVP SEQPPFTEGP GIESFSFDEV  300
YSNGLDIKDG GHADTDREAL WQLPSATDST FATVDSFEQN NKLLEEAINF PVLKTQSSNL  360
SDILKDSFKK SDSFTRWMSK ELAEVDDSQV KSSSGLYWNS EDADNIIGAS SRDQLDQFTL  420
DPMVAQDQLF SITEYFPSWT YAGSKTRVLV TGRFLTSDEV IKLKWSCMFG EVEVPADILA  480
DGTLRCYSPS HKPGRVPFYV TCSNRLACSE VREFEYRPSD SQYMDAPSPH GATNKIYLQA  540
RLDELLSLGQ DEQDEFQAAL SNPTKELIDL NKKITSLMTN NDQWSELLKF ADDNQLAPDD  600
RQDQFVESGM KEKLHIWLLR KAGGGGKGPS VLDDEGQGVL HLAAALGYDW AIRPTITAGV  660
SINFRDVHGW TALHWAAFCG RERTVVALIA LGAAPGALTD PRPDFPSGRT PADLASFNGH  720
KGISGFLAEF SLTSHLQTLN LKEAMGSNAS EVSGLPGIGD VTGRIASPSA GQGLQAGSMG  780
DSLGAVRNAA QAAARIYQVF RVQSFQRKQA VQYEDDNGVI SDERAMSLLS YKPSKPGQFG  840
PMHAAATRIQ NKFRGWKGRK EFLLIRQRIV KIQAHVRGHQ VRKHYRKIIW SVGIVEKVIL  900
RWRRRGAGLR GFRSTEGATD SSTRSSSVDV TPVKPAEDDY NFLQEGRKQT EERLQRALAR  960
VKSMVQYPEA RDQYQRILTV VTKMQESQQT NWTTIKSGGY SKVVLDGVEL ISKATS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG052240.12