PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG052240.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 985aa MW: 110553 Da PI: 6.2082

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG052240.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.6	6.8e-55	6	122	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een + TRIDC4BG052240.10 6 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENIN 97 5559************************************************************************************** PP CG-1 94 fqrrcywlLeeelekivlvhylevk 118 fqrr+yw+Lee++ +ivlvhylevk TRIDC4BG052240.10 98 FQRRSYWMLEEDYMHIVLVHYLEVK 122 ********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 985 aa Download sequence
MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN 60 WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE 120 VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SGNHQGLRAT 180 SPNTGFYSHY QDNSPVIHNE STLGITFNGP STQFDLSSWN EMTKLNKGIH QLPPYQSHVP 240 SEQPPFTEGP GIESFSFDEV YSNGLDIKDG GHADTDREAL WQLPSATDST FATVDSFEQN 300 NKLLEEAINF PVLKTQSSNL SDILKDSFKK SDSFTRWMSK ELAEVDDSQV KSSSGLYWNS 360 EDADNIIGAS SRDQLDQFTL DPMVAQDQLF SITEYFPSWT YAGSKTRVLV TGRFLTSDEV 420 IKLKWSCMFG EVEVPADILA DGTLRCYSPS HKPGRVPFYV TCSNRLACSE VREFEYRPSD 480 SQYMDAPSPH GATNKIYLQA RLDELLSLGQ DEQDEFQAAL SNPTKELIDL NKKITSLMTN 540 NDQWSELLKF ADDNQLAPDD RQDQFVESGM KEKLHIWLLR KAGGGGKGPS VLDDEGQGVL 600 HLAAALGYDW AIRPTITAGV SINFRDVHGW TALHWAAFCG RERTVVALIA LGAAPGALTD 660 PRPDFPSGRT PADLASFNGH KGISGFLAEF SLTSHLQTLN LKEAMGSNAS EVSGLPGIGD 720 VTGRIASPSA GQGLQAGSMG DSLGAVRNAA QAAARIYQVF RVQSFQRKQA VQYEDDNGVI 780 SDERAMSLLS YKPSKPGQFG PMHAAATRIQ NKFRGWKGRK EFLLIRQRIV KIQAHVRGHQ 840 VRKHYRKIIW SVGIVEKVIL RWRRRGAGLR GFRSTEGATD SSTRSSSVDV TPVKPAEDDY 900 NFLQEGRKQT EERLQRALAR VKSMVQYPEA RDQYQRILTV VTKMQESQPV EESMLEESTE 960 MDEGFLMSEF KELWDDDMPP LPGYF

Sequence ? help Back to Top

Protein Sequence Length: 985 aa Download sequence

MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN  60
WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE  120
VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SGNHQGLRAT  180
SPNTGFYSHY QDNSPVIHNE STLGITFNGP STQFDLSSWN EMTKLNKGIH QLPPYQSHVP  240
SEQPPFTEGP GIESFSFDEV YSNGLDIKDG GHADTDREAL WQLPSATDST FATVDSFEQN  300
NKLLEEAINF PVLKTQSSNL SDILKDSFKK SDSFTRWMSK ELAEVDDSQV KSSSGLYWNS  360
EDADNIIGAS SRDQLDQFTL DPMVAQDQLF SITEYFPSWT YAGSKTRVLV TGRFLTSDEV  420
IKLKWSCMFG EVEVPADILA DGTLRCYSPS HKPGRVPFYV TCSNRLACSE VREFEYRPSD  480
SQYMDAPSPH GATNKIYLQA RLDELLSLGQ DEQDEFQAAL SNPTKELIDL NKKITSLMTN  540
NDQWSELLKF ADDNQLAPDD RQDQFVESGM KEKLHIWLLR KAGGGGKGPS VLDDEGQGVL  600
HLAAALGYDW AIRPTITAGV SINFRDVHGW TALHWAAFCG RERTVVALIA LGAAPGALTD  660
PRPDFPSGRT PADLASFNGH KGISGFLAEF SLTSHLQTLN LKEAMGSNAS EVSGLPGIGD  720
VTGRIASPSA GQGLQAGSMG DSLGAVRNAA QAAARIYQVF RVQSFQRKQA VQYEDDNGVI  780
SDERAMSLLS YKPSKPGQFG PMHAAATRIQ NKFRGWKGRK EFLLIRQRIV KIQAHVRGHQ  840
VRKHYRKIIW SVGIVEKVIL RWRRRGAGLR GFRSTEGATD SSTRSSSVDV TPVKPAEDDY  900
NFLQEGRKQT EERLQRALAR VKSMVQYPEA RDQYQRILTV VTKMQESQPV EESMLEESTE  960
MDEGFLMSEF KELWDDDMPP LPGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG052240.10