PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG051260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 336aa    MW: 35982.6 Da    PI: 4.4043
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG051260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-17102151255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp+    +  r++lg+f +ae Aa  +++a+++++g
  TRIDC4BG051260.1 102 QYRGVRRRP-WGKWAAEIRDPV----KgVRVWLGTFPSAEAAALPYDEAARAIRG 151
                       69*******.**********75....44************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MCGGAILAEL IPGAPARRAT SGHGHVWPGK GAKQTKAAAA DDFEAAFREF NEDSDVEDDV  60
VMVMERREEV AESKPFVFAA SPKKQQQEEE EAAPVRRRKP AQYRGVRRRP WGKWAAEIRD  120
PVKGVRVWLG TFPSAEAAAL PYDEAARAIR GPRAKLNFSS SSAVAAAAPG ARKRGRAAPP  180
AAKPAPVITL VDDEEEHASS FVKHEAEASE GSESSGALPD FSWQGISAFD EAPAYPAPEP  240
ETEQLTKRAR TTEAEDTDEG MSAHPASDSD SDALFDALLF ADQFAFFNGG AYESLDSLFS  300
ADAVQSSATA TAVNEAALGL WTFDDDCLVD ECSLSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197109RRKPAQYRGVRRR
2171177ARKRGRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.11e-19ERF family protein