PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4BG051070.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 259aa MW: 27535.2 Da PI: 10.3522

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG051070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.1	4.9e-19	10	54	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W++eEd llv +v+q+G ++W+ I++ ++ gRt+k+c++rw + TRIDC4BG051070.1 10 GSWSPEEDALLVALVRQHGARRWSVISAGVP-GRTGKSCRLRWCNQ 54 89***************************.*********985 PP
2	Myb_DNA-binding	51.4	2.6e-16	63	105	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T++Ed l++ a ++G++ W+ Iar ++ gRt++++k++w++ TRIDC4BG051070.1 63 PFTAQEDALIIAAQSRYGNK-WADIARLLP-GRTDNSVKNHWNSN 105 89****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MEVPVPIKTG SWSPEEDALL VALVRQHGAR RWSVISAGVP GRTGKSCRLR WCNQLSPAVQ 60 HRPFTAQEDA LIIAAQSRYG NKWADIARLL PGRTDNSVKN HWNSNLRRCQ RRAKAMAAAA 120 AARAAASSSS SSGSAARAKT QQQEQVVVMN GTPPAAVHGA GTAAVDDPLP MPSLTLSLGL 180 PQMAADWASE EAKAKEKEKT PPPVGVGDGE VRLMAAMRQL VREEVERQAG QLLYSVIMAT 240 TAARADGTSP SDGPTNGHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	8e-49	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG051070.1