PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG049840.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 703aa    MW: 81960.7 Da    PI: 8.7891
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG049840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1804.3e-2525119191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       +fYn+YA e GFsvrks+ +    n+ i+ r+ vCs++g+re+++ k   ++++rr+r+ tr+gC+akl++++++ +g+w v+++  eH+H+l
  TRIDC4BG049840.1  25 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSRQGFREDKHMKrkmEDRKRRPRSLTRVGCNAKLVITRQEeTGRWFVKDFIDEHSHPL 117
                       6******************************************999888889999*******************99****************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC4BG049840.1 118 AP 119
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    
ASDESMFEYV NVVSKMFDSE AEGYEFYNKY ALEKGFSVRK SYVEWDGSNK YIILRKIVCS  60
RQGFREDKHM KRKMEDRKRR PRSLTRVGCN AKLVITRQEE TGRWFVKDFI DEHSHPLAPR  120
DLSCLLRSHR RISDEQKADI ADMEKCGIRK YRIMDILCFQ YGGFGKVGCI KRDVYNFCHA  180
NKKETISAGD AKTVIMHMMA RRERDVDFFF KYLVDEHGHL KGLFWADSQP QLDYEAFGDV  240
IVFDSTYRTN KYNLPFVPFV GLNHHRSTAI FGCGIISHET SQAYEWMLRT FSDCMAQKHP  300
ISVITDGDLA MQRAIRVVWP DSNHRLCIWH IQQNIVRHLH DDDVKEEFRS FIYDTSSIEE  360
HEIKWIQFLQ QNKVTSEESW LHQMRKLWCA PYLEGRCFLG LSSNQRSESL NSVLHTHLEG  420
KMSLFEMLEH YERCLASRRI NEAIHDVEAL QSVPFTEENA SPLEKHAATV FTPRVFKMVL  480
WSIDAVSKCQ IREILNGAED STYVVSKQER MDKKFGVRIE EQGGLLHRVS CSCRKLECTG  540
TPCSHIFYIL GILKQTIMPG CCVPTRWTMN AKCAYAPTRK NQMYDYSLSL QRYRELRNCS  600
HAASFQACHS DEDYHRLKML LQAQHHGKQS SFELADSKES TNAQHNNIRF GPLMPHSQKV  660
DKVLDPVHVP GRGAPKKRLQ AKTKKSRSQN ICGYYKKPGH NRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17681DRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-97FAR1 family protein