PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG049770.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 317aa    MW: 34476.6 Da    PI: 9.9405
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG049770.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA106.81.7e-33208264158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq Rakle+e+kl  ksrkpylheSRh+hA++R+Rg+gGrF
  TRIDC4BG049770.2 208 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKSRKPYLHESRHQHAMKRARGTGGRF 264
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
GRAGSVPAPA RARPPAIADR FPGPSARFPA GSDWVLAVSI VFRPICRSDS WVHSAAVQLC  60
FRLELRARVE THEMRRKQNM HENGTIMIQF GQQVPNCESS ASDSPQEVSG MSEGSFNEQN  120
DQSGNRDGYT KSDEGKMMSA LSLGNSETAY TPPKPDRTHP FAISYPYADP YYGGAVAAYG  180
THAIMHPQMV GMVPSSRVPL PIEPAAAEEP IYVNAKQYHA ILRRRQLRAK LEAENKLVKS  240
RKPYLHESRH QHAMKRARGT GGRFLNAKEK SEAASGGGNA SARSGHAGVP TDGGGMFSKH  300
DHTLPSGDFH YRARGGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-35NF-YA family protein