PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4BG048390.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 237aa MW: 25581 Da PI: 5.2608

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG048390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.1	1.5e-08	12	45	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++ryp+ +e+ LA++ gL+ qV++WF N R + TRIDC4BG048390.1 12 RCRYPKDSEKVMLARQAGLSRGQVSNWFINARVR 45 69******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
LLCARSLIRH DRCRYPKDSE KVMLARQAGL SRGQVSNWFI NARVRLWKPM VEEMYKEEFG 60 AEMDSTNSSS ENAGNKHSKV DEAACSEDQD RDEFQSTSTH AGASQLLNAY KSEPVGSMDA 120 GPLSSLGGGD MGTYAPAGLS LNHHGPGGGS LLQDAFAHHG DDARFVPYGG NMGDLGGSVS 180 LTLGLQHCNN NNNAGHVPQE QQGLLYSNPG DFDFLNGADD RQRFSSSSSQ LLHDFVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	3e-30	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG048390.1