PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG047780.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 602aa MW: 65977.6 Da PI: 7.1975

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG047780.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.8e-12	448	494	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I +Lq TRIDC4BG047780.10 448 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITHITDLQ 494 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
CSVLMKTEIE EEGIRGSWTE EDKSLCASVL GLDAFTYLTK GGGAISENLV AASGLVGLQN 60 KLQDLVEADG KSLCWNYAIF WQLSHTKSGE LVLGWGDGSC REPHDNEMNS TTRGDIHDAS 120 SLSQQRMRKR VLERLHTAFA GAEEEDDALR IDQVTDTELF FLASMYFAFP RHVGGPGQVF 180 ATGAPLWIPN NPHKVSPSNY CYRGFLASAA GFRTIVLLPF EAGVLELGSM QNVLESAEAL 240 ETIRSVFLGA SSKKAASGKH DENGSAQISP GLAKIFGKDL NLSRPLVNTG ALPLKMNERS 300 WDMQKNCGGE SLLLPNVRKG LQNFTWSQAR GLNSHHQKFG NGILVVKSET SQRSNGAAHS 360 PGLSPFQLQN SQQILTQPPP QSQTPRHIDF SVGSSSKSGV LTSQAALLGG ENGSVDGLCK 420 EQVAPTMEGQ QPRKRGRKPA NGRVEALNHV EAERQRREKL NQRFYALRAV VPNISKMDKA 480 SLLGDAITHI TDLQKKLKEM ESERDMFLES GMVDRRVQTP RPEVDIQVVQ DEVLVRVMSP 540 MDNYPINNVF QAFEEAEVKV GESKIASNNG KVMHSFVIKS PGSEQQTREK LIAAMSRAMN 600 SM

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

CSVLMKTEIE EEGIRGSWTE EDKSLCASVL GLDAFTYLTK GGGAISENLV AASGLVGLQN  60
KLQDLVEADG KSLCWNYAIF WQLSHTKSGE LVLGWGDGSC REPHDNEMNS TTRGDIHDAS  120
SLSQQRMRKR VLERLHTAFA GAEEEDDALR IDQVTDTELF FLASMYFAFP RHVGGPGQVF  180
ATGAPLWIPN NPHKVSPSNY CYRGFLASAA GFRTIVLLPF EAGVLELGSM QNVLESAEAL  240
ETIRSVFLGA SSKKAASGKH DENGSAQISP GLAKIFGKDL NLSRPLVNTG ALPLKMNERS  300
WDMQKNCGGE SLLLPNVRKG LQNFTWSQAR GLNSHHQKFG NGILVVKSET SQRSNGAAHS  360
PGLSPFQLQN SQQILTQPPP QSQTPRHIDF SVGSSSKSGV LTSQAALLGG ENGSVDGLCK  420
EQVAPTMEGQ QPRKRGRKPA NGRVEALNHV EAERQRREKL NQRFYALRAV VPNISKMDKA  480
SLLGDAITHI TDLQKKLKEM ESERDMFLES GMVDRRVQTP RPEVDIQVVQ DEVLVRVMSP  540
MDNYPINNVF QAFEEAEVKV GESKIASNNG KVMHSFVIKS PGSEQQTREK LIAAMSRAMN  600
SM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-132	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG047780.10