PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG046220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 537aa    MW: 59579.9 Da    PI: 6.2776
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG046220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS414.11.2e-1261665361373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++++++c +av++++ +  + l+++l++++s +g+pmqRl ay++e+L ar +++++ lyk+l+++e ++ + se +++++l+++++P++kf
  TRIDC4BG046220.1 166 LKQVIVACGKAVDENNCH-EELLISELQKMVSVSGEPMQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQP-TNSELMSYMHLLYDICPFFKF 256
                       578999******996655.58899********************************************986.567888999************ PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++ aN aI eav+ge+ +HiiDf+i qG QW++++qaLa+R++gpp lRiTg+++++s   +   l  +g++L ++A+++++pfefn+ v+ 
  TRIDC4BG046220.1 257 GYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARASGPPCLRITGIDDSDSAyaRGGGLDIVGRKLYSVAQSCRLPFEFNA-VHA 348
                       ********************************************************988899999************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       + ++++le+L++++gEa+aVn+++qlh+++desv++e++rd++L++vkslsP vv++veqea++n+++F+ r +e+l+yy+a+f+++++  +r
  TRIDC4BG046220.1 349 ASHEVTLEHLDIRKGEAIAVNFAYQLHHTPDESVCIENHRDRILRMVKSLSPSVVTLVEQEANTNTAPFFSRYMETLDYYTAMFEAIDVACSR 441
                       99******************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++++r++ E+++++r+ivn++acegaer+erhe ++kWr+rl +aGF+p+pls  +++++++ll++++s  y++ee++g ++lgWk+r+Lv+ 
  TRIDC4BG046220.1 442 DDKKRMSTEQHCVARDIVNLIACEGAERVERHEPFGKWRSRLAMAGFRPYPLSALVNNTIRTLLNNYNSY-YKLEEKDGVIYLGWKNRKLVVS 533
                       ********************************************************************66.********************** PP

              GRAS 371 SaW 373
                       SaW
  TRIDC4BG046220.1 534 SAW 536
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MSAKASNMSY RYPDNSQIPY YSSSMHVGGN GTCYVQQNHE GHHYMSSDDG SQNSDSKSQV  60
IHPQYSTLES SSANCVYAVN SSTSPQCISG SHISLHDSHS DHTYDSPASG ITEVPGLGFT  120
TLQELADALF GSDSDAVSSD RSSLVIGAAM HQSNWRELLG ISSGDLKQVI VACGKAVDEN  180
NCHEELLISE LQKMVSVSGE PMQRLGAYML EGLVARRYST GHALYKSLKC KEPQPTNSEL  240
MSYMHLLYDI CPFFKFGYMS ANGAIAEAVK GENFIHIIDF QIAQGSQWVT MIQALAARAS  300
GPPCLRITGI DDSDSAYARG GGLDIVGRKL YSVAQSCRLP FEFNAVHAAS HEVTLEHLDI  360
RKGEAIAVNF AYQLHHTPDE SVCIENHRDR ILRMVKSLSP SVVTLVEQEA NTNTAPFFSR  420
YMETLDYYTA MFEAIDVACS RDDKKRMSTE QHCVARDIVN LIACEGAERV ERHEPFGKWR  480
SRLAMAGFRP YPLSALVNNT IRTLLNNYNS YYKLEEKDGV IYLGWKNRKL VVSSAWW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein