PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG043780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | B3 | ||||||||
Protein Properties | Length: 230aa MW: 25814.9 Da PI: 7.6396 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35 | 2.5e-11 | 2 | 52 | 46 | 99 |
EEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 46 WevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 W+vk+ + g+++l++GW++F++a++L+ g f+vF++dg ++ l+vkvf+ TRIDC4BG043780.1 2 WDVKVVLDAD-GHMYLERGWEQFARAHDLRLGYFLVFSYDG--DAVLTVKVFDV 52 9999965555.56789**********************988..55569999985 PP | |||||||
2 | B3 | 40.9 | 3.6e-13 | 130 | 204 | 12 | 86 |
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 +++ l +p +f +hg+ ++++++l++ +g+sW v l++ +++++r ++ GW +F+ +n L egD++ F+ + TRIDC4BG043780.1 130 QEQYLNVPVDFQLAHGYAERSKVELRM---RGKSWLVHLKHnpkTGGRSRASFRYGWHQFCVDNALGEGDTCFFRALR 204 5667899****99**999888766664...67*******997666666669***********************9544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
FWDVKVVLDA DGHMYLERGW EQFARAHDLR LGYFLVFSYD GDAVLTVKVF DVSMCRRHYK 60 HDGDTSTRLF LVLALRFSSE SSSDGDSGSS NTSDGGSGGN NRSLVEMDVE DGPTGQFSAM 120 LRKCNLGMKQ EQYLNVPVDF QLAHGYAERS KVELRMRGKS WLVHLKHNPK TGGRSRASFR 180 YGWHQFCVDN ALGEGDTCFF RALRQGSAGG GGEDHLLKVE VRRRDGSFLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31690.1 | 3e-12 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG043780.1 |