PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG043370.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 326aa    MW: 35710.9 Da    PI: 8.2198
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG043370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.66.4e-152273111093
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                       v +++ l +p +f ++hg+ ++++++l++   +g+sW v+l+++ +s++     l+ GW +F+ +ngL +gD++ F+  g+ s +e +
  TRIDC4BG043370.1 227 VRQKQYLNVPVEFQNAHGYAERSKVELRM---RGKSWFVNLKHSPRSRGrprASLRYGWHQFCVDNGLGVGDTCFFRALGEgSAGEVH 311
                       56677899**********99888766664...67*******994444444669************************88887888544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
SYTPLCSRSA RTPSSSPPSL AGCRCQDGVI QATTAGCALP RRGSAASTRQ GETSSKQETR  60
EMDSVESFQF FQIILENSST RLRLPDKFTT VLLELDGGKP QEVKLRNAGH GRRFWDVKVV  120
LDADGHMYLG FARAHDLRLG YFLVFSFDGD AVLTVKVFDV SMCRRHYQHD DDGSTSSGSS  180
SDGDSGSEDG SSNGDGGGNS SSMAVMGIDD GPASLFTVML RECNLGVRQK QYLNVPVEFQ  240
NAHGYAERSK VELRMRGKSW FVNLKHSPRS RGRPRASLRY GWHQFCVDNG LGVGDTCFFR  300
ALGEGSAGEV HLLKVEVRKR DGSFLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-12B3 family protein