PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042540.21
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 770aa    MW: 86698.6 Da    PI: 4.9842
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042540.21genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.61.1e-1421236128
                NAM   6 rFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                        +F+P+d++l+  +L++++ +        +  +e+ik  d       ++P+d+p  ++++ + ++fF+k+ + +++++   +   +  W+++g
  TRIDC4BG042540.21   2 QFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DISWQKSG 84 
                        7*********.667777665553454432..2233322233338899******.667788999*****9987755333..3...335***** PP

                NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +++++  +g l g+k+++++y + ++++++tdW +h+y++
  TRIDC4BG042540.21  85 PSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 123
                        *******.999***********.5677779*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 770 aa     Download sequence    
AQFNPSDSDL LWHLAAEMGN GLAHRHPFIS EFIKYGDEGA RFGCTHPRDM PGMRQDGHAL  60
HFFHKKVNLH NNENDKDISW QKSGPSRSII LDGGLQGCKE IFALYAFKNS PQRTDWELHQ  120
YHIKNTMENE GELVLSKIFY KSQKCHCECA SKAPVQSAQD NSVTDDDSKE KEGAQLEKLS  180
VNMATESNFV EGNGNNREQM LVEMYPDQDK PCSLKHVLDT ADVNHENQIN DQAETELDHM  240
SLQERYRILL ADMRSCSARV SAEKCALNDM GNSSMQMDAE TSGPVPKSES EEMYGSFLAV  300
YDFICVTLIN VLFCNVGYRN HGGTTYRECS VNGKEIPVED TEGPVNDKAF NSSAELLLSQ  360
TPACGDENVQ LAPRNSGTYL VDVKTEPALD GCAIYPSESP SVKFHHSNNN GLKVSGSLLE  420
CVPKDAEDSL PSLGVKSELS GYELPGLCEN SFISSMEPIV KKPHTRTLNC NGGLAPCSRQ  480
RNKRDSSEKV LEEDGYKNDE GIPYPSRQKR KKKTATDSIE TALEEDAPGL LQILLDKGIV  540
VKEIKLYDVV EDDEMLPDCT ESDFQDLENV ITKLFPQRTS LLKSVAKHGK GGKAIYCLAC  600
LISLIEQSRY LQFRDCPVEW GWCRDLQSFI FVFKSHNRLV LERPEYGYAT YFFEILQSVP  660
IEWQIRRMVT AMKLSSCGRT ALIENRPLLI GEDLSEGEAK VLQEYGWIPN TGLGTLLNYR  720
DRVVHDRWNE KYSTDWRMKI GKLLMNGYSE GELIITHVPL NSEEIKLENP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1479484RQRNKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.17e-30NAC family protein