PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042540.18
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 475aa    MW: 52275.1 Da    PI: 5.1556
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042540.18genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.77.2e-17191451128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                        lp+G +F+P+d++l+  +L++++ +        +  +e+ik  d       ++P+d+p  ++++ + ++fF+k+ + +++++   +   +  
  TRIDC4BG042540.18  19 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DIS 101
                        699************.667777666553454432..2233322233338899******.667788999*****9987755333..3...335 PP

                NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        W+++g +++++  +g l g+k+++++y + ++++++tdW +h+y++
  TRIDC4BG042540.18 102 WQKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 145
                        ************.999***********.5677779*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
ATPAPEGIGG AAQQSWPGLP RGAQFNPSDS DLLWHLAAEM GNGLAHRHPF ISEFIKYGDE  60
GARFGCTHPR DMPGMRQDGH ALHFFHKKVN LHNNENDKDI SWQKSGPSRS IILDGGLQGC  120
KEIFALYAFK NSPQRTDWEL HQYHIKNTME NEGELVLSKI FYKSQKCHCE CASKAPVQSA  180
QDNSVTDDDS KEKEGAQLEK LSVNMATESN GNNREQMLVE MYPDQDKPCS LKHVLDTADV  240
NHENQINDQA ETELDHMSLQ ERYRILLADM RSCSARVSAE KCALNDMGNS SMQMDAETSG  300
PVPKSESEEI NHGGTTYREC SVNGKEIPVE DTEGPVNDKA FNSSAELLLS QTPACGDENV  360
QLAPRNSGTY LVDVKTEPAL DGCAIYPSES PSVKFHHSNN NGLKVSGSLL ECVPKDAEDS  420
LPSLGVKSEL SGYELPGLCE NSFISSMEPI VKKPHTRTLN CNGGLAPCSR QRNKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1470475RQRNKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-37NAC family protein