PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042140.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 391aa MW: 43641.9 Da PI: 5.6764

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042140.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106.2	2.6e-33	50	141	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sw+++gnsfv++d + f++++L+++Fkh+nf+SF+RQLn+YgF+kv+ ++ we++++ F +g+k+ll TRIDC4BG042140.4 50 FLTKVYDMVSDAATDKVMSWTDTGNSFVIWDAHAFERDLLSRHFKHRNFSSFIRQLNTYGFRKVDPDR---------WEWANEGFLRGQKHLL 133 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 + ikrkk+ TRIDC4BG042140.4 134 KIIKRKKR 141 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
ISNEARVSAP RTAMGSSKGS PPPSGAGPSS AGNAPAPVGP APRPPEVAPF LTKVYDMVSD 60 AATDKVMSWT DTGNSFVIWD AHAFERDLLS RHFKHRNFSS FIRQLNTYGF RKVDPDRWEW 120 ANEGFLRGQK HLLKIIKRKK RPQEAGRELE KAPVKAAPGT ENIEIGRYGG LVKEVETLKR 180 DKALLMKQLV DLRLYQQSSN LEVQSLIQRL QVMEQNQKQM MALLAIVVQN PSLLNQLVQQ 240 QQQQRRNNCV YEDGNKKRRF PALEQGPVTD HETSGAGAEI IQYRPPVPET SSQVIADEAF 300 LSATAQPISS PALNMPMDID TQTTSDNLNT QGSSGDIFAD MPALPDFEDM HLWFNEDGEP 360 TLTIQDYDES PQSGQDCQME AQHNYNYPQH G

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

ISNEARVSAP RTAMGSSKGS PPPSGAGPSS AGNAPAPVGP APRPPEVAPF LTKVYDMVSD  60
AATDKVMSWT DTGNSFVIWD AHAFERDLLS RHFKHRNFSS FIRQLNTYGF RKVDPDRWEW  120
ANEGFLRGQK HLLKIIKRKK RPQEAGRELE KAPVKAAPGT ENIEIGRYGG LVKEVETLKR  180
DKALLMKQLV DLRLYQQSSN LEVQSLIQRL QVMEQNQKQM MALLAIVVQN PSLLNQLVQQ  240
QQQQRRNNCV YEDGNKKRRF PALEQGPVTD HETSGAGAEI IQYRPPVPET SSQVIADEAF  300
LSATAQPISS PALNMPMDID TQTTSDNLNT QGSSGDIFAD MPALPDFEDM HLWFNEDGEP  360
TLTIQDYDES PQSGQDCQME AQHNYNYPQH G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	4e-61	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042140.4