PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 348aa MW: 39626.4 Da PI: 5.1405

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106.5	2.1e-33	5	96	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sw+++gnsfv++d + f++++L+++Fkh+nf+SF+RQLn+YgF+kv+ ++ we++++ F +g+k+ll TRIDC4BG042140.1 5 FLTKVYDMVSDAATDKVMSWTDTGNSFVIWDAHAFERDLLSRHFKHRNFSSFIRQLNTYGFRKVDPDR---------WEWANEGFLRGQKHLL 88 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 + ikrkk+ TRIDC4BG042140.1 89 KIIKRKKR 96 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
EVAPFLTKVY DMVSDAATDK VMSWTDTGNS FVIWDAHAFE RDLLSRHFKH RNFSSFIRQL 60 NTYGFRKVDP DRWEWANEGF LRGQKHLLKI IKRKKRPQEA GRELEKAPVK AAPGTENIEI 120 GRYGGLVKEV ETLKRDKALL MKQLVDLRLY QQSSNLEVQS LIQRLQVMEQ NQKQMMALLA 180 IVVQNPSLLN QLVQQQQQQR RNNCVYEDGN KKRRFPALEQ GPVTDHETSG AGAEIIQYRP 240 PVPETSSQVI ADEAFLSATA QPISSPALNM PMDIDTQTTS DNLNTQGSSG DIFADMPALP 300 DFEDMHLWFN EDGEPTLTIQ DYDESPQSGQ DCQMEAQHNY NYPQHASG

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

EVAPFLTKVY DMVSDAATDK VMSWTDTGNS FVIWDAHAFE RDLLSRHFKH RNFSSFIRQL  60
NTYGFRKVDP DRWEWANEGF LRGQKHLLKI IKRKKRPQEA GRELEKAPVK AAPGTENIEI  120
GRYGGLVKEV ETLKRDKALL MKQLVDLRLY QQSSNLEVQS LIQRLQVMEQ NQKQMMALLA  180
IVVQNPSLLN QLVQQQQQQR RNNCVYEDGN KKRRFPALEQ GPVTDHETSG AGAEIIQYRP  240
PVPETSSQVI ADEAFLSATA QPISSPALNM PMDIDTQTTS DNLNTQGSSG DIFADMPALP  300
DFEDMHLWFN EDGEPTLTIQ DYDESPQSGQ DCQMEAQHNY NYPQHASG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-62	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042140.1