PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG041370.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 279aa    MW: 29935.7 Da    PI: 7.9791
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG041370.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.1e-11114161355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       + h ++Er+RR+++ + f  L +++P +     kK +K++ L  +++Y+k+L+
  TRIDC4BG041370.2 114 QEHVIAERKRREKLQQQFVSLATIVPGL-----KKTDKISLLGSTIDYVKQLE 161
                       5799************************.....9*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
PGMDQQFVEP PLLGHQEQYY TSPMATPSFH PSRSSDFPSF GGSSSLPNLP FGSATVKNEL  60
GQPSPPPSSN FLSFGAGQAG TLNFSGGAWQ HDGVEGTMQL QAPERRSRAP ANAQEHVIAE  120
RKRREKLQQQ FVSLATIVPG LKKTDKISLL GSTIDYVKQL EDKVKALEEQ GSRRSSESTT  180
VFESKCRIPA ADNDAAGPSG SGDAAEDSSP AVKASIRGHT ALLKICCKER RGVLVMVLSE  240
LENQGLSIIN TNVVPFTDSC LNITITAKAR PLSIAQMRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120125ERKRRE
2121126RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-28bHLH family protein