PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4BG041370.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 333aa MW: 36907 Da PI: 10.4678

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG041370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18	5.3e-06	141	168	3	30
HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 3 rahnerErrRRdriNsafeeLrellPka 30 + h ++Er+RR+++ + f L +++P + TRIDC4BG041370.1 141 QEHVIAERKRREKLQQQFVSLATIVPGL 168 5799**********************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MEQPNQWLTQ TEQEELAYMY QQEGVPAPGM DQQFVEPPLL GHQEQYYTSP MATPSFHPSR 60 SSDFPSFGGS SSLPNLPFGS ATVKNELGQP SPPPSSNFLS FGAGQAGTLN FSGGAWQHDG 120 VEGTMQLQAP ERRSRAPANA QEHVIAERKR REKLQQQFVS LATIVPGLKK VHDKETWLHS 180 CGHQLPAPSL ISYPSPLFSD RQDLSAGEHH RLREAAGGQG EGPGGARLAE VVGVHHRLRE 240 QVPHTRRRQR RSRTQRVRGR GRGLEPGRQG QHPGAHGAPE NLLQGEERGA GDGPLRAREP 300 GPLHHKHQRR PVHRLLPQHH HHGQDRRGLF VRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	152	ERKRRE
2	148	153	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-11	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG041370.1