PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG038990.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 1006aa MW: 114826 Da PI: 6.41

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG038990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.1	1.4e-18	109	215	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkek.dg 74 Y++YA ++GF+ ++++ ++ +g +++tf C++ gk++e + ek+ r+++ ++tgCka+l ++ ++ ++ TRIDC4BG038990.1 109 LYKAYAFRMGFHAVRRTCHNY--EGIRYRSTFSCTQAGKSREGAATpsedsgaryplrnkrgaatPEKRARRTTAEKTGCKAMLIIRDKRvND 199 7*********999998887..7889**********9999999***********9877777888899********999 PP FAR1 75 kwevtkleleHnHela 90 +w+v+ ++leHnH+++ TRIDC4BG038990.1 200 RWKVEFVDLEHNHPCT 215 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1006 aa Download sequence
MEEGSERPPH SRATQAQNPS CEEEEAAAAA GRVKDEIADD LNADPAEDED EEEVVVEEGE 60 DEVLVASDDD DGAADGAGGG ENFVPRTLEE ALVPRVGTVF DSVDEAFSLY KAYAFRMGFH 120 AVRRTCHNYE GIRYRSTFSC TQAGKSREGA ATPSEDSGAR YPLRNKRGAA TPEKRARRTT 180 AEKTGCKAML IIRDKRVNDR WKVEFVDLEH NHPCTPDMVR FLKAYREMPE SAKKKAKITV 240 EMDEMVEKSL SEIAETRKFP TRPKRSLSGG AAAGGLRFNR TDSFVQRFGD EDLIAVKKFI 300 EMMQEKKPNF IHSWDLDQES RMKNFFWTDL RSQAQYRYFG DVISLDVMYL QHSRASLPLA 360 TLLGVNNHGH LVLLGCGLLS KDSKENYVWL LKRWLSCMNG KPPEAITTSY SDVVAEAVSE 420 VLPDARHRFC FWHILKKLQE NVGRTHEKEA ISLRFKEVVY DTVTLTDFEK EWEAMVEHYK 480 LKDNEWFSAL YSCRKQWAPG YVNHSFWAGT SAIRKVEKPD PYFDGVVTSK TTLPVFLEQY 540 ETTLRGKLER EAYDDLRSYY SRLTLLSGLP FEEQLLELYT VPMFQAFQDE IKQLMHVICK 600 EVDRSGNSIT YMVSELIQGK KVDYTVVYNN SDKDVWCICR SFPSRGILCS HALSVLKQEN 660 VLMLPSKYIL SRWRKDFRII HASASSNSVA LQRDSSIFDD LYVRGHEYLE DVIDIGAREP 720 ELKEFVLSAM KEAKGKLVRP GQTQQGDQRV DVNMAVTGQV SADRRVDVNM ASNTTSIIHR 780 DRRVEANMPL NTRALVHEDN MASNMPSLIH GDRRADMEMQ TPHLIHREGR VDMNMTAPHL 840 MQRERRVDVN MTSPHLIHGD RRVDMNLGSP HFIHSDRRVD MNLTSPHLIH GDRRVDMNMA 900 SPHLIHGDRR VDMNMTSPHM IHGDTRVDMN MVSTSQDDAM HTFDLANVNL ESSLPMAATD 960 FMQMHPHPPV YHPKQLLNMR DQVMDSNKRS NVETNTYFIG GGMHVG

Sequence ? help Back to Top

Protein Sequence Length: 1006 aa Download sequence

MEEGSERPPH SRATQAQNPS CEEEEAAAAA GRVKDEIADD LNADPAEDED EEEVVVEEGE  60
DEVLVASDDD DGAADGAGGG ENFVPRTLEE ALVPRVGTVF DSVDEAFSLY KAYAFRMGFH  120
AVRRTCHNYE GIRYRSTFSC TQAGKSREGA ATPSEDSGAR YPLRNKRGAA TPEKRARRTT  180
AEKTGCKAML IIRDKRVNDR WKVEFVDLEH NHPCTPDMVR FLKAYREMPE SAKKKAKITV  240
EMDEMVEKSL SEIAETRKFP TRPKRSLSGG AAAGGLRFNR TDSFVQRFGD EDLIAVKKFI  300
EMMQEKKPNF IHSWDLDQES RMKNFFWTDL RSQAQYRYFG DVISLDVMYL QHSRASLPLA  360
TLLGVNNHGH LVLLGCGLLS KDSKENYVWL LKRWLSCMNG KPPEAITTSY SDVVAEAVSE  420
VLPDARHRFC FWHILKKLQE NVGRTHEKEA ISLRFKEVVY DTVTLTDFEK EWEAMVEHYK  480
LKDNEWFSAL YSCRKQWAPG YVNHSFWAGT SAIRKVEKPD PYFDGVVTSK TTLPVFLEQY  540
ETTLRGKLER EAYDDLRSYY SRLTLLSGLP FEEQLLELYT VPMFQAFQDE IKQLMHVICK  600
EVDRSGNSIT YMVSELIQGK KVDYTVVYNN SDKDVWCICR SFPSRGILCS HALSVLKQEN  660
VLMLPSKYIL SRWRKDFRII HASASSNSVA LQRDSSIFDD LYVRGHEYLE DVIDIGAREP  720
ELKEFVLSAM KEAKGKLVRP GQTQQGDQRV DVNMAVTGQV SADRRVDVNM ASNTTSIIHR  780
DRRVEANMPL NTRALVHEDN MASNMPSLIH GDRRADMEMQ TPHLIHREGR VDMNMTAPHL  840
MQRERRVDVN MTSPHLIHGD RRVDMNLGSP HFIHSDRRVD MNLTSPHLIH GDRRVDMNMA  900
SPHLIHGDRR VDMNMTSPHM IHGDTRVDMN MVSTSQDDAM HTFDLANVNL ESSLPMAATD  960
FMQMHPHPPV YHPKQLLNMR DQVMDSNKRS NVETNTYFIG GGMHVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-82	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG038990.1