PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4BG038940.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 460aa MW: 51863.8 Da PI: 8.7938

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG038940.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.6	7.4e-27	39	129	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY+ YA+++GF++r+s+ ++s+r+++i++r+ vCskeg++e+++ + ++++++r+ tr+gCka++++kk gkw+vtk+++ HnH TRIDC4BG038940.4 39 EFYSLYARHAGFRIRISRYTRSRRDNSIISRRIVCSKEGFHETRNCEglhPDQKQQERTGTRVGCKAMIMIKKFGPGKWVVTKFVKTHNHG 129 6*****************************************9999999999**********************************6 PP
2	FAR1	90.2	2.7e-28	177	269	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YA+ GF+ r+s+ +s+r+++i++r+ vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4BG038940.4 177 FYINYARLNGFRARISRYCRSRRDNSIISRQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSLL 269 9***************************************99999998899999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MEISSNEPSE VENIIGHEDD TELTPCEGME FESEDAAREF YSLYARHAGF RIRISRYTRS 60 RRDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR VGCKAMIMIK KFGPGKWVVT 120 KFVKTHNHGS VPPRKLDIRS AHQDLNPIEK PHSTEVNPVD EPVEGMEFDS EEAAKLFYIN 180 YARLNGFRAR ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG 240 CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAESAA KSSDPDEAKV 300 EEYSAGIQCN STDSLTVLYN KLCQEAIKFA KEGSVTEEIY HVAMSALKEA AEKVAQVKSC 360 HPIMPHRGVS GSESKHKVVQ MKTMSASQCS DVAKQKTIPS QLTMFQESTS KLMFIPTNLL 420 TDSGLANSDN NHPSSCAFTS SGKYTMETRQ AWIRMFLFAC

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MEISSNEPSE VENIIGHEDD TELTPCEGME FESEDAAREF YSLYARHAGF RIRISRYTRS  60
RRDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR VGCKAMIMIK KFGPGKWVVT  120
KFVKTHNHGS VPPRKLDIRS AHQDLNPIEK PHSTEVNPVD EPVEGMEFDS EEAAKLFYIN  180
YARLNGFRAR ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG  240
CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAESAA KSSDPDEAKV  300
EEYSAGIQCN STDSLTVLYN KLCQEAIKFA KEGSVTEEIY HVAMSALKEA AEKVAQVKSC  360
HPIMPHRGVS GSESKHKVVQ MKTMSASQCS DVAKQKTIPS QLTMFQESTS KLMFIPTNLL  420
TDSGLANSDN NHPSSCAFTS SGKYTMETRQ AWIRMFLFAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	8e-31	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG038940.4