PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG038940.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 448aa    MW: 48359.2 Da    PI: 6.5954
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG038940.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.32.2e-122355790
              FAR1 57 etrtgCkaklkvkkekdgkwevtkleleHnHela 90
                       tr+gCka+++vkk+++gkw+v+k+e+eHnH+l 
  TRIDC4BG038940.3  2 ITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSLL 35
                      68*****************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MITRVGCKAM IVVKKMNSGK WMVSKFEKEH NHSLLSSKQA PSTSNITSGE NAESAAKSSD  60
PDEAKVEEYS AGIQCNSTDS LTVLYNKLCQ EAIKFAKEGS VTEEIYHVAM SALKEAAEKV  120
AQVKSCHPIM PHRGVSGSES KHKVVQMKTM SASQCSDVAK QKTIPSQLTM FQESTSKLMF  180
IPTNLLTDSG LANSDNNHPS SCAFTSSGRQ GRHGSECSYL HAENRKEGCP EKYQNSTSSR  240
ATQGNHSTYH GHSEETTVAI PAIPLTLYMP LSRNSPGASA DGQYKLLAAP IEAVPISYRP  300
AEPIRQPKRS FCNLGPLPGV MSELTRREKG PHPLVHATAL ACGARVVPVE EAASLIKAIE  360
SKIRSGGAKI ARLPSSRLTR LVPEAVSMSS SSEDGEENDH SEPPAVNVEG YCHDDQISEE  420
MKLQGEASEL ETDSENCSGH ENHDTADC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-12FAR1 family protein