PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG036590.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 175aa MW: 18472 Da PI: 7.6284

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG036590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00081	44	66	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H TRIDC4BG036590.1 44 FECKTCNRRFPSFQALGGHRASH 66 89**********99999998887 PP
2	zf-C2H2	11.5	0.0009	87	107	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cg F L H+r+H TRIDC4BG036590.1 87 CSICGLEFAVGQALCGHMRRH 107 ********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
QQAESTSVSL LDLDSGDMAR ILLLFSGHHQ HHAHYGPSSP ERVFECKTCN RRFPSFQALG 60 GHRASHKKPR LADGAGAEPP KPKVHGCSIC GLEFAVGQAL CGHMRRHRAV AAAGAGVGLG 120 LSLGLGIGPN EGGNKKAATA ELALDLNEPA LEEEPADRAM LGLAVEFPVV VDFRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-27	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG036590.1