PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG036580.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 196aa    MW: 21025.1 Da    PI: 9.5375
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG036580.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.000695274123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C+ C+++Fs+   L  H  +H
  TRIDC4BG036580.1 52 FECKTCNRRFSSFQALGGHRASH 74
                      89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
GKRSRQQAET TSVSLMDLDG GDMARILVIF SGHHNTHGHH GIAGPAPPER VFECKTCNRR  60
FSSFQALGGH RASHKKPRLA DGEPPKPKVH GCSICGLEFA VGQALGGHMR RHRAVAAAGA  120
GVERGLSLDL DLGPRDHGKK KTTAVAAGLM IDLNMPALAL EEEEPADRAK LGLAVEMQFP  180
MPSSLHHAWP ACSRRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.11e-19C2H2 family protein