PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC4BG031620.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 219aa MW: 24830.5 Da PI: 10.0401

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG031620.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	110.3	9.7e-35	51	105	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFveav+qLGG++kAtPkti++lm+v+gLtl+h+kSHLQkYRl TRIDC4BG031620.13 51 KPRLKWTPELHDRFVEAVNQLGGPDKATPKTIMRLMGVPGLTLYHLKSHLQKYRL 105 79****************************************************8 PP
2	Myb_DNA-binding	72.7	5.4e-23	53	104	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++v+av+qlGg+ t+ktI+r mg g+tl+++ks++qky+ TRIDC4BG031620.13 53 RLKWTPELHDRFVEAVNQLGGPdkaTPKTIMRLMGvPGLTLYHLKSHLQKYR 104 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MFMQMYHHQQ QLQSHNQLLA SRQTFPSERH LLLQGGIIPG ESGLILSTDA KPRLKWTPEL 60 HDRFVEAVNQ LGGPDKATPK TIMRLMGVPG LTLYHLKSHL QKYRLSKNLH VQANVGNSRT 120 AAVGCTIATE KQSEGNGSPV GHHLNTQTNK SMHIGEALQM QIEVQRRLHE QLEVQKQHNI 180 NYITYKSHFP LHKYELYLTN ALNGLLLAST ISPLWLTIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	3e-61	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG031620.13