PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG031600.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 264aa MW: 28395.3 Da PI: 11.637

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG031600.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.1	2e-15	18	78	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ TRIDC4BG031600.3 18 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLerfgAVGDANVFYWFQNRRSRSRR 78 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.3	9.2e-35	17	80	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q TRIDC4BG031600.3 17 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 80 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
GSPDERRSGG RGAGEPVRSR WTPKPEQILI LESIFNSGMV NPPKDETVRI RKLLERFGAV 60 GDANVFYWFQ NRRSRSRRRQ RQMQAAAAAA AAAAAAASSA TANSLPAASA TIGLPSGTGS 120 VHPMAIGGCA SQYEQQATSA AGVRADGGRR HRRQRRSLRH LASDGIRWEP RRTLLLGAEH 180 RCAAAVLLVP VTATITVFIN GVPMEVPRGP IDLRAMFGQD VVLLHSTGTL LPVNDYGILI 240 QSLQMGESYF LVTIHIASQV HSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	1e-34	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG031600.3