PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG031600.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 262aa MW: 28169 Da PI: 11.7357 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.1 | 2e-15 | 22 | 82 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ TRIDC4BG031600.2 22 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLerfgAVGDANVFYWFQNRRSRSRR 82 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 107.3 | 9.1e-35 | 21 | 84 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q TRIDC4BG031600.2 21 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 84 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
QSSGGSPDER RSGGRGAGEP VRSRWTPKPE QILILESIFN SGMVNPPKDE TVRIRKLLER 60 FGAVGDANVF YWFQNRRSRS RRRQRQMQAA AAAAAAAAAA ASSATANSLP AASATIGLPS 120 GTGSVHPMAI GGCASQYEQQ ATSSSSAGVR ADGGRRHRRQ RRSLRHLASD GIRWEPRRTL 180 LLGAEHRCAA AVLLVPVTAT ITVFINGVPM EVPRGPIDLR AMFGQDVVLL HSTGTLLPVN 240 DYGILIQSLQ MGESYFLVSR QT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 1e-34 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG031600.2 |