PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4BG026790.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 176aa MW: 20053.9 Da PI: 10.7227

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG026790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	64.6	1.8e-20	44	123	19	98
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 +++P arikki++adedv +i+ +Pvl+s+a elf+ +l rs+ + ++ +tl+ ++++v+r fdfl++iv + TRIDC4BG026790.2 44 TRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQCVKRYSSFDFLTEIVNK 123 689*************************************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
TTKQETQSSR RTRKENTQKV DYDCRHRARR GVGVATKMRK KLGTRFPAAR IKKIMQADED 60 VGKIALAVPV LVSRALELFL QDLIDRSYKI TLQSGAKTLN SFHLKQCVKR YSSFDFLTEI 120 VNKVPDLGGG ESCGDERGLP RRRKFSNGSD PENEEPRSSK MVQFHHISAE LNFLSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	144	PRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12480.1	4e-51	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG026790.2