PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022100.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 645aa    MW: 72200.8 Da    PI: 5.5326
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022100.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS334.42.1e-1022656401373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd++  ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts   + e l a+kl+  +s + k+
  TRIDC4BG022100.6 265 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYQSLVAKSTS---VGEFLRAYKLYMAASSFRKV 354
                       5789***************************************************************999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++   + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g   + ++eetg+rL+k A+e+gvpf+++  +  
  TRIDC4BG022100.6 355 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPGLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFKYHG-IPA 446
                       ***********************************************************999***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +le+++ e+L+++p+E+l+V ++    +l+desv ++      +rd vL+ +++++P+v++ +  +  ++++ F++rf eal +ysa fd+l+
  TRIDC4BG022100.6 447 KLETVHAEDLNIDPDEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLSNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 539
                       ******************************99887665555669************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a++pr++++r  +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG+++vpls+ ++k +k  ++  + + + ++ ++ +l++gWk+r
  TRIDC4BG022100.6 540 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLRQVPLSSAVVKLVKDKVKSLYHKDFLIDVDNRWLLQGWKGR 632
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC4BG022100.6 633 VLYAMSTW 640
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 645 aa     Download sequence    
PDEFLRAGDF LADAEPFSPS LFLDLPPTPS PPRAPFAPAS DDLDFISRML MEEDIDDKFF  60
YQYPDHPAIL SAQHRFAQII SDSNTTPSTD DSANTTVASS TFSSDSATAR STSSCSDSAD  120
GDMDMLNMAF RKGMEEANKF LPTNNTLDAI SNRPALRDFT CDQLKKEEVD RLRMLMFSNG  180
RGRKNRHGVE DLEAEAGRRS KLMMPEQEES GVGEMVEEIM LHGHDIIMKG IEDLHIAMGT  240
EAEKNHRKGT GKAARGRRGA SEVDLRTMLI HCAQAVATGD HRGSNELLRQ IKQHSSPKGD  300
ATQRLAYCFA EGLEARLAGT GSHVYQSLVA KSTSVGEFLR AYKLYMAASS FRKVNFIFVG  360
KIIMDAMVGK SRLHIVDYNV EYGFQWPGLL QMLAEREGGP PEVRITGIDV PQPGFRPAFQ  420
IEETGRRLSK CAQEFGVPFK YHGIPAKLET VHAEDLNIDP DEVLIVTSQC GFSNLMDESV  480
IMDRQDIPSP RDMVLSNIRN MRPDVFIDCV VNGTYSAPFF VTRFREALFT YSAQFDMLDA  540
TIPRDNDDRL LIERDIFGPC ALNVIACEGA DRVDRPETYK QWQVRGHRAG LRQVPLSSAV  600
VKLVKDKVKS LYHKDFLIDV DNRWLLQGWK GRVLYAMSTW VAGDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-140GRAS family protein