PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022100.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 767aa    MW: 84721.6 Da    PI: 5.9393
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022100.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.73.3e-1023867611373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd++  ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts   + e l a+kl+  +s + k+
  TRIDC4BG022100.5 386 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYQSLVAKSTS---VGEFLRAYKLYMAASSFRKV 475
                       5789***************************************************************999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++   + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g   + ++eetg+rL+k A+e+gvpf+++  +  
  TRIDC4BG022100.5 476 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPGLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFKYHG-IPA 567
                       ***********************************************************999***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +le+++ e+L+++p+E+l+V ++    +l+desv ++      +rd vL+ +++++P+v++ +  +  ++++ F++rf eal +ysa fd+l+
  TRIDC4BG022100.5 568 KLETVHAEDLNIDPDEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLSNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 660
                       ******************************99887665555669************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a++pr++++r  +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG+++vpls+ ++k +k  ++  + + + ++ ++ +l++gWk+r
  TRIDC4BG022100.5 661 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLRQVPLSSAVVKLVKDKVKSLYHKDFLIDVDNRWLLQGWKGR 753
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC4BG022100.5 754 VLYAMSTW 761
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 767 aa     Download sequence    
MAATPDEFLR AGDFLADAEP FSPSLFLDLP PTPSPPRAPF APASDDLDFI SRMLMEEDID  60
DKFFYQYPDH PAILSAQHRF AQIISDSNTT PSTDDSANTT VASSTFSSDS ATARSTSSSN  120
PTWPYERIDL SQPLQSRPYI GLGFPVDDAN NLLFSGVCTP TAGYFGHAPA LSKGNNDHFV  180
APAGQNGRGT GIQSFAAFSN SSAAKTLSNN GTEKAAKPAT PPVCRGGPGT PASAFFSGQA  240
DGDMDMLNMA FRKGMEEANK FLPTNNTLDA ISNRPALRDF TCDQLKKEEV DRLRMLMFSN  300
GRGRKNRHGV EDLEAEAGRR SKLMMPEQEE SGVGEMVEEI MLHGHDIIMK GIEDLHIAMG  360
TEAEKNHRKG TGKAARGRRG ASEVDLRTML IHCAQAVATG DHRGSNELLR QIKQHSSPKG  420
DATQRLAYCF AEGLEARLAG TGSHVYQSLV AKSTSVGEFL RAYKLYMAAS SFRKVNFIFV  480
GKIIMDAMVG KSRLHIVDYN VEYGFQWPGL LQMLAEREGG PPEVRITGID VPQPGFRPAF  540
QIEETGRRLS KCAQEFGVPF KYHGIPAKLE TVHAEDLNID PDEVLIVTSQ CGFSNLMDES  600
VIMDRQDIPS PRDMVLSNIR NMRPDVFIDC VVNGTYSAPF FVTRFREALF TYSAQFDMLD  660
ATIPRDNDDR LLIERDIFGP CALNVIACEG ADRVDRPETY KQWQVRGHRA GLRQVPLSSA  720
VVKLVKDKVK SLYHKDFLID VDNRWLLQGW KGRVLYAMST WVAGDHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-139GRAS family protein