PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022100.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 747aa    MW: 82689.2 Da    PI: 6.2186
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022100.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.83.1e-1023627371373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd++  ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts   + e l a+kl+  +s + k+
  TRIDC4BG022100.4 362 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYQSLVAKSTS---VGEFLRAYKLYMAASSFRKV 451
                       5789***************************************************************999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++   + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g   + ++eetg+rL+k A+e+gvpf+++  +  
  TRIDC4BG022100.4 452 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPGLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFKYHG-IPA 543
                       ***********************************************************999***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +le+++ e+L+++p+E+l+V ++    +l+desv ++      +rd vL+ +++++P+v++ +  +  ++++ F++rf eal +ysa fd+l+
  TRIDC4BG022100.4 544 KLETVHAEDLNIDPDEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLSNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 636
                       ******************************99887665555669************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a++pr++++r  +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG+++vpls+ ++k +k  ++  + + + ++ ++ +l++gWk+r
  TRIDC4BG022100.4 637 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLRQVPLSSAVVKLVKDKVKSLYHKDFLIDVDNRWLLQGWKGR 729
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC4BG022100.4 730 VLYAMSTW 737
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
SRLRPYTPNA WAWAWDMAAT PDEFLRAGDF LADAEPFSPS LFLDLPPTPS PPRAPFAPAS  60
DDLDFISRML MEEDIDDKFF YQYPDHPAIL SAQHRFAQII SDSNTTPSTD DSANTTVASS  120
TFSSDSATAR STSSCSDSAT NTAKSTSSSH SNDHFVAPAG QNGRGTGIQS FAAFSNSSAA  180
KTLSNNGTEK AAKPATPPVC RGGPGTPASA FFSGQADGDM DMLNMAFRKG MEEANKFLPT  240
NNTLDAISNR PALRDFTCDQ LKKEEVDRLR MLMFSNGRGR KNRHGVEDLE AEAGRRSKLM  300
MPEQEESGVG EMVEEIMLHG HDIIMKGIED LHIAMGTEAE KNHRKGTGKA ARGRRGASEV  360
DLRTMLIHCA QAVATGDHRG SNELLRQIKQ HSSPKGDATQ RLAYCFAEGL EARLAGTGSH  420
VYQSLVAKST SVGEFLRAYK LYMAASSFRK VNFIFVGKII MDAMVGKSRL HIVDYNVEYG  480
FQWPGLLQML AEREGGPPEV RITGIDVPQP GFRPAFQIEE TGRRLSKCAQ EFGVPFKYHG  540
IPAKLETVHA EDLNIDPDEV LIVTSQCGFS NLMDESVIMD RQDIPSPRDM VLSNIRNMRP  600
DVFIDCVVNG TYSAPFFVTR FREALFTYSA QFDMLDATIP RDNDDRLLIE RDIFGPCALN  660
VIACEGADRV DRPETYKQWQ VRGHRAGLRQ VPLSSAVVKL VKDKVKSLYH KDFLIDVDNR  720
WLLQGWKGRV LYAMSTWVAG DHDNSKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-139GRAS family protein