PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022100.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 686aa    MW: 76867 Da    PI: 5.4355
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022100.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS334.12.5e-1023016761373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd++  ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts   + e l a+kl+  +s + k+
  TRIDC4BG022100.2 301 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYQSLVAKSTS---VGEFLRAYKLYMAASSFRKV 390
                       5789***************************************************************999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++   + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g   + ++eetg+rL+k A+e+gvpf+++  +  
  TRIDC4BG022100.2 391 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPGLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFKYHG-IPA 482
                       ***********************************************************999***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +le+++ e+L+++p+E+l+V ++    +l+desv ++      +rd vL+ +++++P+v++ +  +  ++++ F++rf eal +ysa fd+l+
  TRIDC4BG022100.2 483 KLETVHAEDLNIDPDEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLSNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 575
                       ******************************99887665555669************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a++pr++++r  +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG+++vpls+ ++k +k  ++  + + + ++ ++ +l++gWk+r
  TRIDC4BG022100.2 576 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLRQVPLSSAVVKLVKDKVKSLYHKDFLIDVDNRWLLQGWKGR 668
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC4BG022100.2 669 VLYAMSTW 676
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 686 aa     Download sequence    
DEFLRAGDFL ADAEPFSPSL FLDLPPTPSP PRAPFAPASD DLDFISRMLM EEDIDDKFFY  60
QYPDHPAILS AQHRFAQIIS DSNTTPSTDD SANTTVASST FSSDSATASW PYERIDLSQP  120
LQSRPYIGLG FPVDDANNLL FSGVCTPTAG YFGHADGDMD MLNMAFRKGM EEANKFLPTN  180
NTLDAISNRP ALRDFTCDQL KKEEVDRLRM LMFSNGRGRK NRHGVEDLEA EAGRRSKLMM  240
PEQEESGVGE MVEEIMLHGH DIIMKGIEDL HIAMGTEAEK NHRKGTGKAA RGRRGASEVD  300
LRTMLIHCAQ AVATGDHRGS NELLRQIKQH SSPKGDATQR LAYCFAEGLE ARLAGTGSHV  360
YQSLVAKSTS VGEFLRAYKL YMAASSFRKV NFIFVGKIIM DAMVGKSRLH IVDYNVEYGF  420
QWPGLLQMLA EREGGPPEVR ITGIDVPQPG FRPAFQIEET GRRLSKCAQE FGVPFKYHGI  480
PAKLETVHAE DLNIDPDEVL IVTSQCGFSN LMDESVIMDR QDIPSPRDMV LSNIRNMRPD  540
VFIDCVVNGT YSAPFFVTRF REALFTYSAQ FDMLDATIPR DNDDRLLIER DIFGPCALNV  600
IACEGADRVD RPETYKQWQV RGHRAGLRQV PLSSAVVKLV KDKVKSLYHK DFLIDVDNRW  660
LLQGWKGRVL YAMSTWVAGD HDNSKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-139GRAS family protein