PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022070.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 650aa    MW: 72387.2 Da    PI: 6.0254
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022070.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS336.93.5e-1032756462373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+cA+a+s+++ + a +lL+r++++++p+gd+ qRla+yf+eAL arla+ +sely++l +++ts   +++ l+a +l+  ++ + k++
  TRIDC4BG022070.8 275 HTLLLNCAQALSTDNRQTAGELLKRIKQHSTPKGDAAQRLAHYFAEALDARLAGRGSELYQSLMARRTS---VADFLKANQLYMAACCCKKVA 364
                       679**************************************************************9999...********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++ aN++I +av g++r+Hi+D+++sqGlQWp Ll+ La+R++gpp+++iTg++ p++g   +  +eetg+rL++fA+ +gvpf+f+  +a +
  TRIDC4BG022070.8 365 FIFANKTICNAVVGKSRLHIVDYGLSQGLQWPGLLRMLAAREGGPPEVKITGIDLPQPGfhGAYHIEETGRRLSNFARVFGVPFKFHG-IAAK 456
                       **********************************************************999999************************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        e++++e+L+++++E+l+V +  +   l+de++  +   +rd+vL+ ++++ P+v+++   + +++++ Fl+rf eal  ysa fd l+a++p
  TRIDC4BG022070.8 457 RETVQPEDLNIDRDEVLVVISLCHFRLLMDENLGFDTpsPRDQVLNNIRKMLPDVFIHGIMNGSYGATYFLTRFREALFNYSAQFDLLDATVP 549
                       9**********************9999999998655444****************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r++e r  +Er ++gr++ nv+acega+r+er et+++W+ r ++aG++++pl+ +++  +   ++  + + + v++++ +l+  Wk+r L++
  TRIDC4BG022070.8 550 RDNEGRLLLERDIFGRSALNVIACEGADRVERPETYKQWQLRNHRAGLTQLPLNPDVVRLVLDKVKDNYHKDFVVDDDQRWLLHRWKGRVLYA 642
                       ******************************************************************999888********************* PP

              GRAS 370 vSaW 373
                       +S W
  TRIDC4BG022070.8 643 LSTW 646
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 650 aa     Download sequence    
PSLFLGLPPT PRGVEDGDSS FDDMALPYIS RLLEEDMEDH FFYLYPNHPA LLRAQLPFAQ  60
ILVDVADSAS GSTSALSPSS STSTFDATAS TTPSATSPYD AEIQISRPPY TQVLGLASGS  120
PDTQSSALLS GDEEAQNPSS DFVTGNYLLP GDQDMLNMAF LKGMEEAKKF LPPNSSLPAM  180
KVDQVVGGAL AGAGLKKKRD TLEPDMGRAS KLMMPEQEED GARELFDEMM FQEHEICMKG  240
VQQLRIAVDS EPGKNRRKKG RPRRDSSDSE MVDLHTLLLN CAQALSTDNR QTAGELLKRI  300
KQHSTPKGDA AQRLAHYFAE ALDARLAGRG SELYQSLMAR RTSVADFLKA NQLYMAACCC  360
KKVAFIFANK TICNAVVGKS RLHIVDYGLS QGLQWPGLLR MLAAREGGPP EVKITGIDLP  420
QPGFHGAYHI EETGRRLSNF ARVFGVPFKF HGIAAKRETV QPEDLNIDRD EVLVVISLCH  480
FRLLMDENLG FDTPSPRDQV LNNIRKMLPD VFIHGIMNGS YGATYFLTRF REALFNYSAQ  540
FDLLDATVPR DNEGRLLLER DIFGRSALNV IACEGADRVE RPETYKQWQL RNHRAGLTQL  600
PLNPDVVRLV LDKVKDNYHK DFVVDDDQRW LLHRWKGRVL YALSTWVADN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-136GRAS family protein