PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022070.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 588aa    MW: 66132.2 Da    PI: 6.0659
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022070.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS321.81.4e-982105792373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av + d + a +lL++++++asp+gd++qRla  f+e+L+arl++++ ++y  l+++ ts   ++++++a++lf  ++ + k++
  TRIDC4BG022070.4 210 HTLLIHCAKAVMD-DRRSAGELLKEIKQHASPTGDATQRLAYWFAEGLEARLTGTGRQVYGLLTAECTS---TVRHMQAYQLFMSTCCFRKVA 298
                       679********97.8999******************************************999998888...899****************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +l aN+aI +a+ g +r+Hi+D+++  G+QWp Ll+ LasR++gpp++RiT ++ p +g   ++ +e++g++L+++A+elgvpf++++ ++ +
  TRIDC4BG022070.4 299 FLFANKAIFNAAVGRSRLHIVDYGLHCGFQWPELLRWLASRDGGPPEVRITHIELPLPGvyPEKHMEQIGNQLTDIAQELGVPFKYRA-IMAQ 390
                       ********************************************************99999***************************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       ++++ +e+L+++p+EalaVn +++  +l+desv ++s  +rd vL  + +++P+v+v +  + ++ ++ Fl rf eal y+salfd+l+a++p
  TRIDC4BG022070.4 391 WQTICIEDLDMEPDEALAVNDQFNFRTLMDESVVIASpnPRDVVLGNISKMKPDVFVQSTVNGSY-GTFFLSRFREALFYHSALFDMLDATMP 482
                       *********************************9998889***********************99.789************************ PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       res+ r  +Er ++g+ + n+va eg++r+er et+++W+ r ++aG++++pl+ +++k a+ ++   + + + ++e++++l++gWk+r L++
  TRIDC4BG022070.4 483 RESKLRLALERDVFGWMVLNAVAYEGEDRVERGETYKHWQIRNQRAGLRQLPLNRETVKMARDMVMGDYHKDFAIDEDHQWLLQGWKGRILYA 575
                       **************************************************************9998888788********************* PP

              GRAS 370 vSaW 373
                        S W
  TRIDC4BG022070.4 576 HSTW 579
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    
MAATPVFPVF PDLPLMSHDD SNCFAVQDHL ALPYIAQILM EEEDDVDEDN PALLKAQRPF  60
AQILSSSMHA STLMADQGGA LAIDVHSPSS PIFKFKGVDE VRSLLLLPDG DYSTHMFSTA  120
FLRGMEEANK FLPTNCELTT TGGHDQPKEK SGRGRKDRHG DVEVDVSRTS RLVEAGAGEV  180
FDQTLIAMGN ETGNSNKKGR KSKARVVDLH TLLIHCAKAV MDDRRSAGEL LKEIKQHASP  240
TGDATQRLAY WFAEGLEARL TGTGRQVYGL LTAECTSTVR HMQAYQLFMS TCCFRKVAFL  300
FANKAIFNAA VGRSRLHIVD YGLHCGFQWP ELLRWLASRD GGPPEVRITH IELPLPGVYP  360
EKHMEQIGNQ LTDIAQELGV PFKYRAIMAQ WQTICIEDLD MEPDEALAVN DQFNFRTLMD  420
ESVVIASPNP RDVVLGNISK MKPDVFVQST VNGSYGTFFL SRFREALFYH SALFDMLDAT  480
MPRESKLRLA LERDVFGWMV LNAVAYEGED RVERGETYKH WQIRNQRAGL RQLPLNRETV  540
KMARDMVMGD YHKDFAIDED HQWLLQGWKG RILYAHSTWV AEGASSHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-126GRAS family protein