PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022060.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 642aa    MW: 72142.1 Da    PI: 5.7
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS312.41e-952636332373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       + lLl cA+ v++g+ + a +lL++++++as +gd+ qRla++f+++L+arla+++s++yk+l +++ts   + e l+ ++lf  ++ + +++
  TRIDC4BG022060.1 263 RGLLLCCAQEVATGNRHGAGNLLKQIRQHASATGDAAQRLAHCFAKGLEARLAGTGSQVYKSLMAKHTS---TMEFLKGYELFMATCSFKRVA 352
                       679*************************************************************99999...899****************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +     +I +aveg++++Hi+D+++ +G QWp Ll  La+R++gp ++RiTg++ p++g   +++leetg+ L++ A+++g+pf+f+  +a +
  TRIDC4BG022060.1 353 FTFSSMTIFDAVEGKSKLHIVDYGLHYGCQWPGLLAWLATRDGGPLEVRITGIDLPQPGfrPAKRLEETGRALSNCARQFGLPFKFRG-IAAK 444
                       **********************************************************9*****************************.799* PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       +e+++ e+L+++p+E+l+Vn  ++  +l+des+ ++   +rd vL+ +++++P v++    + +  ++ Fl+rf eal++ys++fd+l+a+ p
  TRIDC4BG022060.1 445 WETIRAEDLNIDPDEVLVVNDLFNFNTLMDESLVIDRpsPRDVVLSNIREMQPVVFIQGVVNGSS-GPFFLARFREALSFYSSVFDMLDATTP 536
                       ********************************98877669*************888777666655.899************************ PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       ++s +r ++Er ++g+ + n +ace a+r+er et+++W+ r ++aG++++pl+  ++k a   ++  + +++ v+ ++g+l++gWk+r L++
  TRIDC4BG022060.1 537 PDSYQRFVLERDMFGQCALNTIACESADRVERPETYKQWQLRNQRAGLRQLPLKPIITKVATGKVKSLYHKEFVVDVDQGWLLQGWKGRILYA 629
                       *********************************************************************999********************* PP

              GRAS 370 vSaW 373
                        SaW
  TRIDC4BG022060.1 630 HSAW 633
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    
IHHPEELLGL KEHMEPPPQS PSVYLDIPPS PYGGTVGDLV LPYITRILME EDIDDRFFYQ  60
YPDHLAFLQA QQQFTQILDD AKNLLSGEGG DMEKMHSDES LQGIRGGSMC LADKDVPSWT  120
FSDGAEVDNN GDQSKLNPSN RDMLNFAFLK GMEEANKFLP RDNQPQADVF SINQAKEIFG  180
GRKARRDADK PEEVVGRASK LLMPELEEDG AREMINKIML NSYELCGETM EELQITMENI  240
RADRKNKKAV RGKQGKKEAV DLRGLLLCCA QEVATGNRHG AGNLLKQIRQ HASATGDAAQ  300
RLAHCFAKGL EARLAGTGSQ VYKSLMAKHT STMEFLKGYE LFMATCSFKR VAFTFSSMTI  360
FDAVEGKSKL HIVDYGLHYG CQWPGLLAWL ATRDGGPLEV RITGIDLPQP GFRPAKRLEE  420
TGRALSNCAR QFGLPFKFRG IAAKWETIRA EDLNIDPDEV LVVNDLFNFN TLMDESLVID  480
RPSPRDVVLS NIREMQPVVF IQGVVNGSSG PFFLARFREA LSFYSSVFDM LDATTPPDSY  540
QRFVLERDMF GQCALNTIAC ESADRVERPE TYKQWQLRNQ RAGLRQLPLK PIITKVATGK  600
VKSLYHKEFV VDVDQGWLLQ GWKGRILYAH SAWVADDTSS EY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-142GRAS family protein