PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022000.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 641aa    MW: 71773 Da    PI: 7.0047
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.15.3e-1022586302373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cAeav+++d ++a  lL+++++++ p+gd+ qRla yf+e+L+arla+++ ++y+++++ + +  +++e +++++l   ++ +lk+s
  TRIDC4BG022000.1 258 ETLLIRCAEAVATNDRSNAGDLLKKIKQHSLPTGDARQRLAYYFAEGLEARLAGTGRQMYHSITMANHT--STVELFKSYHLCIAACCFLKVS 348
                       789**********************************************************99888887..599999**************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                           N+ I++av+g +++Hi+ ++++ G+QWp Ll+ La+R++gpp++RiTg+ sp++g   +++ +et++rL+  A+++gvpf+f++ +  +
  TRIDC4BG022000.1 349 LNFSNKNIYNAVAGRKKLHIVHYGVNDGFQWPDLLRWLADREGGPPEVRITGIISPQPGpcPAKQAKETKRRLSYCARQFGVPFKFHA-IIAK 440
                       ************************************************************99**************************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvs..leserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       le+++ e+L+++p+E+l+Vn +++  +l+des++  +e++rd vL+++++++P +++++  +  ++s+ F++rf +al+ ++a fd++e+++ 
  TRIDC4BG022000.1 441 LEAVHAEDLDIDPDEVLVVNNMFHFRTLMDESLTfdMENPRDLVLNTIRKMKPSMLIHAAVNGAYSSAFFMTRFRQALNNFTAQFDMMETTMT 533
                       *******************************98622677****************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       +++++r  vEr++++r+++n++aceg +r+er +++++W++r ++aG+++++l+ +++k  k  ++k + + ++++e++ +l+lgWk+r L++
  TRIDC4BG022000.1 534 QNKDNRLLVERHIFARSVMNIIACEGPDRVERPQNYKEWHARNQRAGLRQLSLDPDIVKMLKDQVKKQYHKHFMIDEDQRWLLLGWKGRVLYA 626
                       *********************************************************************999********************* PP

              GRAS 370 vSaW 373
                       +S W
  TRIDC4BG022000.1 627 LSTW 630
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    
MAAAQEELLG LVKPAPPPPS IFLDQPSMTN GDSQPQQPQD DLALAYISRM LMEEDIIDKF  60
FYQHPEHPTL LQAEQPFAEI LSASVITTAG AHGSSALIPS QGNNTGIMAS GFLSSEVHSP  120
PLILNGRVTA EEPSSGVTMG DLSSMAFFKG MEEANSFLPT VNVMVDARGR KKRSGMDGET  180
EACMGRSSKQ IAVRVLAHND SAEEDTALEL DLLILNGYNM HSNETMKERG DQAAHQSIRM  240
KAPCVRHSAR QKVVADLETL LIRCAEAVAT NDRSNAGDLL KKIKQHSLPT GDARQRLAYY  300
FAEGLEARLA GTGRQMYHSI TMANHTSTVE LFKSYHLCIA ACCFLKVSLN FSNKNIYNAV  360
AGRKKLHIVH YGVNDGFQWP DLLRWLADRE GGPPEVRITG IISPQPGPCP AKQAKETKRR  420
LSYCARQFGV PFKFHAIIAK LEAVHAEDLD IDPDEVLVVN NMFHFRTLMD ESLTFDMENP  480
RDLVLNTIRK MKPSMLIHAA VNGAYSSAFF MTRFRQALNN FTAQFDMMET TMTQNKDNRL  540
LVERHIFARS VMNIIACEGP DRVERPQNYK EWHARNQRAG LRQLSLDPDI VKMLKDQVKK  600
QYHKHFMIDE DQRWLLLGWK GRVLYALSTW VADDASGSQL E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1280285LKKIKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-123GRAS family protein