PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG021410.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 446aa    MW: 50483.1 Da    PI: 7.3396
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG021410.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS271.72.4e-83214334374
              GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfsh 95 
                       +L+ec e+v +g+ e++++   ++s+las  + p+qRl   ++  La+rl   v++ ++al  ps+    ++s   aa++ f ++sP+l  ++
  TRIDC4BG021410.2  21 ALYECMEHVIEGSVEKTDRSFMKISKLASVVDGPLQRLSRIIAHSLARRLICPVQGFAAALiDPSHYL--EQSCLRAARENFADISPYLSTGF 111
                       79**************************************************9999887774444443..35555567788************ PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqG..lQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                       +t N+a+le v+  + v i+D++ s     QW+ +lq + sRp+gpp+lR+T+v++    ++e l +++  L k A++l++ f f+  v  +l
  TRIDC4BG021410.2 112 VTINRAMLEQVQDRKVVRIVDLSCSTThqWQWIKILQDFHSRPGGPPELRLTVVHE----DSEFLDNMQACLCKQAANLKLCFYFDK-VIGKL 199
                       **********************98766115789***********************....9**************************.68899 PP

              GRAS 187 edleleeL....rvkpgEalaVnlvlqlhrll...........................................desvsleserdevLklvk 232
                       e+l++++L    +++ gEa++++++lq+hrll                                           + + +++s   ++L +++
  TRIDC4BG021410.2 200 ETLDFSNLreilKINFGEAVVISCALQMHRLLavddsisrdftaqlqqmanmarlkqmacsacspastlnypqtpSPQRQIPSLLVSFLYAIR 292
                       9999998843335555********************************************************988667777778899****** PP

              GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325
                        l Pk++v++eq+adhns+ F +rf+++++yy+alfdsl+a   ++s +r+ vEr+llg+ei+n++ c g +r erhe+l++W++ ++++   
  TRIDC4BG021410.2 293 ALDPKIIVMMEQDADHNSPLFHDRFTKTVDYYAALFDSLNAV-DAASPQRARVERVLLGEEIKNILVCDGVHRHERHERLSQWEMHMQRCEVD 384
                       ***************************************876.7899********************************************** PP

              GRAS 326 pvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                        vpls +a  + k  l  ++ +  r +e+++ l+l+W + +L+s+SaWr
  TRIDC4BG021410.2 385 HVPLSFEAIREGKERLMSYGLKQCRSKEDKAGLLLCWGTTRLYSISAWR 433
                       ********************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MDRPCAHKQV TADDLTQLGP ALYECMEHVI EGSVEKTDRS FMKISKLASV VDGPLQRLSR  60
IIAHSLARRL ICPVQGFAAA LIDPSHYLEQ SCLRAARENF ADISPYLSTG FVTINRAMLE  120
QVQDRKVVRI VDLSCSTTHQ WQWIKILQDF HSRPGGPPEL RLTVVHEDSE FLDNMQACLC  180
KQAANLKLCF YFDKVIGKLE TLDFSNLREI LKINFGEAVV ISCALQMHRL LAVDDSISRD  240
FTAQLQQMAN MARLKQMACS ACSPASTLNY PQTPSPQRQI PSLLVSFLYA IRALDPKIIV  300
MMEQDADHNS PLFHDRFTKT VDYYAALFDS LNAVDAASPQ RARVERVLLG EEIKNILVCD  360
GVHRHERHER LSQWEMHMQR CEVDHVPLSF EAIREGKERL MSYGLKQCRS KEDKAGLLLC  420
WGTTRLYSIS AWRPHSSNAA PNNVAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.18e-73GRAS family protein