PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG021410.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 305aa    MW: 34702.9 Da    PI: 7.2703
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG021410.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS209.32.2e-641292124374
              GRAS 124 QWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL....rvkpgEalaVnlvlqlhr 212
                       QW+ +lq + sRp+gpp+lR+T+v++    ++e l +++  L k A++l++ f f+  v  +le+l++++L    +++ gEa++++++lq+hr
  TRIDC4BG021410.1   1 QWIKILQDFHSRPGGPPELRLTVVHE----DSEFLDNMQACLCKQAANLKLCFYFDK-VIGKLETLDFSNLreilKINFGEAVVISCALQMHR 88 
                       9*************************....9**************************.688999999998843335555************** PP

              GRAS 213 ll...........................................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                       ll                                           + + +++s   ++L +++ l Pk++v++eq+adhns+ F +rf+++++
  TRIDC4BG021410.1  89 LLavddsisrdftaqlqqmanmarlkqmacsacspastlnypqtpSPQRQIPSLLVSFLYAIRALDPKIIVMMEQDADHNSPLFHDRFTKTVD 181
                       ******************************************988667777778899************************************ PP

              GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveees 355
                       yy+alfdsl+a   ++s +r+ vEr+llg+ei+n++ c g +r erhe+l++W++ ++++    vpls +a  + k  l  ++ +  r +e++
  TRIDC4BG021410.1 182 YYAALFDSLNAV-DAASPQRARVERVLLGEEIKNILVCDGVHRHERHERLSQWEMHMQRCEVDHVPLSFEAIREGKERLMSYGLKQCRSKEDK 273
                       *********876.7899******************************************************************888******* PP

              GRAS 356 gslvlgWkdrpLvsvSaWr 374
                       + l+l+W + +L+s+SaWr
  TRIDC4BG021410.1 274 AGLLLCWGTTRLYSISAWR 292
                       ******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
QWIKILQDFH SRPGGPPELR LTVVHEDSEF LDNMQACLCK QAANLKLCFY FDKVIGKLET  60
LDFSNLREIL KINFGEAVVI SCALQMHRLL AVDDSISRDF TAQLQQMANM ARLKQMACSA  120
CSPASTLNYP QTPSPQRQIP SLLVSFLYAI RALDPKIIVM MEQDADHNSP LFHDRFTKTV  180
DYYAALFDSL NAVDAASPQR ARVERVLLGE EIKNILVCDG VHRHERHERL SQWEMHMQRC  240
EVDHVPLSFE AIREGKERLM SYGLKQCRSK EDKAGLLLCW GTTRLYSISA WRPHSSNAAP  300
NNVAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.13e-59GRAS family protein