PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG019350.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 256aa    MW: 27870.6 Da    PI: 6.7265
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG019350.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS265.32e-811244120374
              GRAS 120 sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp..gEalaVnlvlql 210
                       +qGlQWp L++ LasRp+gpp++R+Tg+g+    s e+le+tg+rL++fA++lg+pfef + va +  +l++e+L v++  +Ea+aV++ +  
  TRIDC4BG019350.5   1 MQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMEALEATGKRLSDFAHTLGLPFEFYP-VAGKAGNLDPEKLGVDTrrREAVAVHWLH-- 86 
                       69****************************....***************************.799**********999888*********9.. PP

              GRAS 211 hrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacega 303
                       h+l+d +++ ++    +L+l+++l Pkvv++veq+++h s+sFl+rf+ea++yysalfdsl+a+++++s+er++vE++ll+rei+nv+a  g 
  TRIDC4BG019350.5  87 HSLYDVTGNDSN----TLNLIQRLAPKVVTMVEQDLSH-SGSFLARFVEAIHYYSALFDSLDASYSEDSSERHVVEQQLLAREIRNVLAVGGP 174
                       999988888888....**********************.899*************************************************** PP

              GRAS 304 errerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       +r+ + + +++Wre+l ++GF++++l  +aa+qa+lll +++sdgy++ ee+g+l lgWkd  L+++SaWr
  TRIDC4BG019350.5 175 ARTGDIK-FGNWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGTLKLGWKDLCLLTASAWR 244
                       *999987.**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MQGLQWPGLF HILASRPGGP PRVRLTGLGA SMEALEATGK RLSDFAHTLG LPFEFYPVAG  60
KAGNLDPEKL GVDTRRREAV AVHWLHHSLY DVTGNDSNTL NLIQRLAPKV VTMVEQDLSH  120
SGSFLARFVE AIHYYSALFD SLDASYSEDS SERHVVEQQL LAREIRNVLA VGGPARTGDI  180
KFGNWREKLA QSGFRAASLA GSAAAQASLL LGMFPSDGYT LVEENGTLKL GWKDLCLLTA  240
SAWRPVQALG PAQFDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-130GRAS family protein