PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG019350.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 679aa    MW: 72350 Da    PI: 6.4376
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG019350.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS411.76.8e-1263086722374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPil 91 
                        +lLl+cAe v+s+dl +aq++L ++ ela+p g+++qR+aayf+eA++arl +s+ +ly+ lp  +++  +    s+++aa+++f+ +sP++
  TRIDC4BG019350.2 308 LTLLLQCAESVNSDDLDEAQRALLEIAELATPFGTSTQRVAAYFAEAMSARLISSCLGLYAPLPNASSPAASrlvNSRVAAAFQVFNGISPFV 400
                       579************************************************************77666655568788899999********** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kfsh+taNqaI ea+e+e+rvHi+D+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s e+le+tg+rL++fA++lg+pfef + va 
  TRIDC4BG019350.2 401 KFSHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMEALEATGKRLSDFAHTLGLPFEFYP-VAG 488
                       **********************************************************....***************************.799 PP

              GRAS 185 rledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                       +  +l++e+L v++  +Ea+aV++ +  h+l+d +++ ++    +L+l+++l Pkvv++veq+++h s+sFl+rf+ea++yysalfdsl+a++
  TRIDC4BG019350.2 489 KAGNLDPEKLGVDTrrREAVAVHWLH--HSLYDVTGNDSN----TLNLIQRLAPKVVTMVEQDLSH-SGSFLARFVEAIHYYSALFDSLDASY 574
                       **********999888*********9..999988888888....**********************.899*********************** PP

              GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                       +++s+er++vE++ll+rei+nv+a  g +r+ + + +++Wre+l ++GF++++l  +aa+qa+lll +++sdgy++ ee+g+l lgWkd  L+
  TRIDC4BG019350.2 575 SEDSSERHVVEQQLLAREIRNVLAVGGPARTGDIK-FGNWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGTLKLGWKDLCLL 666
                       *****************************999987.********************************************************* PP

              GRAS 369 svSaWr 374
                       ++SaWr
  TRIDC4BG019350.2 667 TASAWR 672
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 679 aa     Download sequence    
MGSSSLLLFP SSSSSAPNHS SYSHAHAAAS ASRSALLPPL PSPSPSDLFL YLDQLDHQEG  60
AAAMVRKRPA PDVDLPPPRR HVTGDLSDVT AATGGAAPPQ QLPPAVAGSA QLPALPMQLP  120
AFGSHLQAPV LAMDVVVAPQ VATEVNVNNN STAWVDGIIR DIIGSSGAAV SVAQLIHNVR  180
EIIHPCNPGL ASLLELRLRS LLASDLVQHQ PPPPPPLHHP PSLLPGAGGN TMLSAPPVPA  240
LPPPPPPDKR RREEEQPNQP PQSPKPPPSA EETAAAAAAA AAAASAALKE RKEEQRRRQR  300
DEEGLHLLTL LLQCAESVNS DDLDEAQRAL LEIAELATPF GTSTQRVAAY FAEAMSARLI  360
SSCLGLYAPL PNASSPAASR LVNSRVAAAF QVFNGISPFV KFSHFTANQA IQEAFEREDR  420
VHIVDLDIMQ GLQWPGLFHI LASRPGGPPR VRLTGLGASM EALEATGKRL SDFAHTLGLP  480
FEFYPVAGKA GNLDPEKLGV DTRRREAVAV HWLHHSLYDV TGNDSNTLNL IQRLAPKVVT  540
MVEQDLSHSG SFLARFVEAI HYYSALFDSL DASYSEDSSE RHVVEQQLLA REIRNVLAVG  600
GPARTGDIKF GNWREKLAQS GFRAASLAGS AAAQASLLLG MFPSDGYTLV EENGTLKLGW  660
KDLCLLTASA WRPVQALGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein