PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC4BG017760.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 886aa MW: 96057.9 Da PI: 6.1877

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG017760.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.2	0.00068	691	728	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a K s + Lek+v+++ Lq TRIDC4BG017760.5 691 RQLIQDRIKELREMVPNgA------KCSIDALLEKTVKHMLFLQ 728 67799**********66......999999******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 886 aa Download sequence
MAVGDALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG 60 CSAAVDSICS LVRKDMAEQV HVVGEGTVGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY 120 QFRAGIKTIA IIPVLPRGVL QLGSTGVVME NTSFVMHAKK LCSQLNQRSS MASSASVKST 180 SNQSRPLHGA SNIQAADNSF SQFPVIREQY RRSDSATASS SKSLNASLFE AAQQNGLTGR 240 EHIVYGKPND MFVQQASYCD NRLGSNTQSA EISSGLVPSS LASVEQQQML MNTIGQLEFG 300 SGTDLARSAL LKSLLYRNPF MHETSDMKLS HGRVGLPQGT AGHGSYGFLP GSAGVVSTTL 360 CTSSQVSEQG SHSSSGMLRQ KQPPVSCNVP QSSEFTMKMV HQERRSSEGA LPVSSQSDVQ 420 VSNCLNGMSQ ENLLSRSGHM QKDQNADRAN DPRVAVSTQG VKNMDGCMLP AMPSETTHSL 480 LLQPTWDNDL FDIFGSEFHQ LGHNVDANLV SSCDAKSHSL DREATEPSIC LDSSSLFSSL 540 DNDFPCSGIF SLTDTDQLLD AVISNVNPSS KQSSDDNASC KTALTDIPNI SHFGLEELKQ 600 CDSSGIPSTV IKNESTQIVK QPYYFDKTED GCLSQNNGAQ KSQIRLWIEN GQNMKCESAS 660 ASNSKGLDTQ SKSNRKRSRP GESSKARPKD RQLIQDRIKE LREMVPNGAK CSIDALLEKT 720 VKHMLFLQSV TKHADKLKDS TESKILGSEN GPVWKDYFEG GATWAFDVGS QSMTCPIIVE 780 DLDRPRQMLV EMICEDRGIF LEIADFIKGL GLTILRGVME ARKSKIWARF TVEANRDVTR 840 MEIFLSLVRL LEPNCDGSGA AENPNSVNMP LGLVRQPVIP ATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 886 aa Download sequence

MAVGDALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG  60
CSAAVDSICS LVRKDMAEQV HVVGEGTVGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY  120
QFRAGIKTIA IIPVLPRGVL QLGSTGVVME NTSFVMHAKK LCSQLNQRSS MASSASVKST  180
SNQSRPLHGA SNIQAADNSF SQFPVIREQY RRSDSATASS SKSLNASLFE AAQQNGLTGR  240
EHIVYGKPND MFVQQASYCD NRLGSNTQSA EISSGLVPSS LASVEQQQML MNTIGQLEFG  300
SGTDLARSAL LKSLLYRNPF MHETSDMKLS HGRVGLPQGT AGHGSYGFLP GSAGVVSTTL  360
CTSSQVSEQG SHSSSGMLRQ KQPPVSCNVP QSSEFTMKMV HQERRSSEGA LPVSSQSDVQ  420
VSNCLNGMSQ ENLLSRSGHM QKDQNADRAN DPRVAVSTQG VKNMDGCMLP AMPSETTHSL  480
LLQPTWDNDL FDIFGSEFHQ LGHNVDANLV SSCDAKSHSL DREATEPSIC LDSSSLFSSL  540
DNDFPCSGIF SLTDTDQLLD AVISNVNPSS KQSSDDNASC KTALTDIPNI SHFGLEELKQ  600
CDSSGIPSTV IKNESTQIVK QPYYFDKTED GCLSQNNGAQ KSQIRLWIEN GQNMKCESAS  660
ASNSKGLDTQ SKSNRKRSRP GESSKARPKD RQLIQDRIKE LREMVPNGAK CSIDALLEKT  720
VKHMLFLQSV TKHADKLKDS TESKILGSEN GPVWKDYFEG GATWAFDVGS QSMTCPIIVE  780
DLDRPRQMLV EMICEDRGIF LEIADFIKGL GLTILRGVME ARKSKIWARF TVEANRDVTR  840
MEIFLSLVRL LEPNCDGSGA AENPNSVNMP LGLVRQPVIP ATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-52	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG017760.5