PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG017760.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 887aa MW: 96186 Da PI: 6.1877

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG017760.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.2	0.00068	692	729	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a K s + Lek+v+++ Lq TRIDC4BG017760.4 692 RQLIQDRIKELREMVPNgA------KCSIDALLEKTVKHMLFLQ 729 67799**********66......999999******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 887 aa Download sequence
MAVGDALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG 60 CSAAVDSICS LVRKDMAEQV HVVGEGTVGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY 120 QFRAGIKTIA IIPVLPRGVL QLGSTGVQVM ENTSFVMHAK KLCSQLNQRS SMASSASVKS 180 TSNQSRPLHG ASNIQAADNS FSQFPVIREQ YRRSDSATAS SSKSLNASLF EAAQQNGLTG 240 REHIVYGKPN DMFVQQASYC DNRLGSNTQS AEISSGLVPS SLASVEQQQM LMNTIGQLEF 300 GSGTDLARSA LLKSLLYRNP FMHETSDMKL SHGRVGLPQG TAGHGSYGFL PGSAGVVSTT 360 LCTSSQVSEQ GSHSSSGMLR QKQPPVSCNV PQSSEFTMKM VHQERRSSEG ALPVSSQSDV 420 QVSNCLNGMS QENLLSRSGH MQKDQNADRA NDPRVAVSTQ GVKNMDGCML PAMPSETTHS 480 LLLQPTWDND LFDIFGSEFH QLGHNVDANL VSSCDAKSHS LDREATEPSI CLDSSSLFSS 540 LDNDFPCSGI FSLTDTDQLL DAVISNVNPS SKQSSDDNAS CKTALTDIPN ISHFGLEELK 600 QCDSSGIPST VIKNESTQIV KQPYYFDKTE DGCLSQNNGA QKSQIRLWIE NGQNMKCESA 660 SASNSKGLDT QSKSNRKRSR PGESSKARPK DRQLIQDRIK ELREMVPNGA KCSIDALLEK 720 TVKHMLFLQS VTKHADKLKD STESKILGSE NGPVWKDYFE GGATWAFDVG SQSMTCPIIV 780 EDLDRPRQML VEMICEDRGI FLEIADFIKG LGLTILRGVM EARKSKIWAR FTVEANRDVT 840 RMEIFLSLVR LLEPNCDGSG AAENPNSVNM PLGLVRQPVI PATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 887 aa Download sequence

MAVGDALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG  60
CSAAVDSICS LVRKDMAEQV HVVGEGTVGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY  120
QFRAGIKTIA IIPVLPRGVL QLGSTGVQVM ENTSFVMHAK KLCSQLNQRS SMASSASVKS  180
TSNQSRPLHG ASNIQAADNS FSQFPVIREQ YRRSDSATAS SSKSLNASLF EAAQQNGLTG  240
REHIVYGKPN DMFVQQASYC DNRLGSNTQS AEISSGLVPS SLASVEQQQM LMNTIGQLEF  300
GSGTDLARSA LLKSLLYRNP FMHETSDMKL SHGRVGLPQG TAGHGSYGFL PGSAGVVSTT  360
LCTSSQVSEQ GSHSSSGMLR QKQPPVSCNV PQSSEFTMKM VHQERRSSEG ALPVSSQSDV  420
QVSNCLNGMS QENLLSRSGH MQKDQNADRA NDPRVAVSTQ GVKNMDGCML PAMPSETTHS  480
LLLQPTWDND LFDIFGSEFH QLGHNVDANL VSSCDAKSHS LDREATEPSI CLDSSSLFSS  540
LDNDFPCSGI FSLTDTDQLL DAVISNVNPS SKQSSDDNAS CKTALTDIPN ISHFGLEELK  600
QCDSSGIPST VIKNESTQIV KQPYYFDKTE DGCLSQNNGA QKSQIRLWIE NGQNMKCESA  660
SASNSKGLDT QSKSNRKRSR PGESSKARPK DRQLIQDRIK ELREMVPNGA KCSIDALLEK  720
TVKHMLFLQS VTKHADKLKD STESKILGSE NGPVWKDYFE GGATWAFDVG SQSMTCPIIV  780
EDLDRPRQML VEMICEDRGI FLEIADFIKG LGLTILRGVM EARKSKIWAR FTVEANRDVT  840
RMEIFLSLVR LLEPNCDGSG AAENPNSVNM PLGLVRQPVI PATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-52	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG017760.4