PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG017760.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 769aa MW: 83751.1 Da PI: 6.648

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG017760.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.5	0.00058	574	611	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a K s + Lek+v+++ Lq TRIDC4BG017760.2 574 RQLIQDRIKELREMVPNgA------KCSIDALLEKTVKHMLFLQ 611 67799**********66......999999******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
MHYQFRAGIK TIAIIPVLPR GVLQLGSTGV VMENTSFVMH AKKLCSQLNQ RSSMASSASV 60 KSTSNQSRPL HGASNIQAAD NSFSQFPVIR EQYRRSDSAT ASSSKSLNAS LFEAAQQNGL 120 TGREHIVYGK PNDMFVQQAS YCDNRLGSNT QSAEISSGLV PSSLASVEQQ QMLMNTIGQL 180 EFGSGTDLAR SALLKSLLYR NPFMHETSDM KLSHGRVGLP QGTAGHGSYG FLPGSAGVVS 240 TTLCTSSQVS EQGSHSSSGM LRQKQPPVSC NVPQSSEFTM KMVHQERRSS EGALPVSSQS 300 DVQVSNCLNG MSQENLLSRS GHMQKDQNAD RANDPRVAVS TQGVKNMDGC MLPAMPSETT 360 HSLLLQPTWD NDLFDIFGSE FHQLGHNVDA NLVSSCDAKS HSLDREATEP SICLDSSSLF 420 SSLDNDFPCS GIFSLTDTDQ LLDAVISNVN PSSKQSSDDN ASCKTALTDI PNISHFGLEE 480 LKQCDSSGIP STVIKNESTQ IVKQPYYFDK TEDGCLSQNN GAQKSQIRLW IENGQNMKCE 540 SASASNSKGL DTQSKSNRKR SRPGESSKAR PKDRQLIQDR IKELREMVPN GAKCSIDALL 600 EKTVKHMLFL QSVTKHADKL KDSTESKILG SENGPVWKDY FEGGATWAFD VGSQSMTCPI 660 IVEDLDRPRQ MLVEMICEDR GIFLEIADFI KGLGLTILRG VMEARKSKIW ARFTVEANRD 720 VTRMEIFLSL VRLLEPNCDG SGAAENPNSV NMPLGLVRQP VIPATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

MHYQFRAGIK TIAIIPVLPR GVLQLGSTGV VMENTSFVMH AKKLCSQLNQ RSSMASSASV  60
KSTSNQSRPL HGASNIQAAD NSFSQFPVIR EQYRRSDSAT ASSSKSLNAS LFEAAQQNGL  120
TGREHIVYGK PNDMFVQQAS YCDNRLGSNT QSAEISSGLV PSSLASVEQQ QMLMNTIGQL  180
EFGSGTDLAR SALLKSLLYR NPFMHETSDM KLSHGRVGLP QGTAGHGSYG FLPGSAGVVS  240
TTLCTSSQVS EQGSHSSSGM LRQKQPPVSC NVPQSSEFTM KMVHQERRSS EGALPVSSQS  300
DVQVSNCLNG MSQENLLSRS GHMQKDQNAD RANDPRVAVS TQGVKNMDGC MLPAMPSETT  360
HSLLLQPTWD NDLFDIFGSE FHQLGHNVDA NLVSSCDAKS HSLDREATEP SICLDSSSLF  420
SSLDNDFPCS GIFSLTDTDQ LLDAVISNVN PSSKQSSDDN ASCKTALTDI PNISHFGLEE  480
LKQCDSSGIP STVIKNESTQ IVKQPYYFDK TEDGCLSQNN GAQKSQIRLW IENGQNMKCE  540
SASASNSKGL DTQSKSNRKR SRPGESSKAR PKDRQLIQDR IKELREMVPN GAKCSIDALL  600
EKTVKHMLFL QSVTKHADKL KDSTESKILG SENGPVWKDY FEGGATWAFD VGSQSMTCPI  660
IVEDLDRPRQ MLVEMICEDR GIFLEIADFI KGLGLTILRG VMEARKSKIW ARFTVEANRD  720
VTRMEIFLSL VRLLEPNCDG SGAAENPNSV NMPLGLVRQP VIPATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	5e-53	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG017760.2